Pseudomonas lijiangensis: KQP88_20005
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Entry
KQP88_20005 CDS
T08713
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
plij
Pseudomonas lijiangensis
Pathway
plij00470
D-Amino acid metabolism
plij00550
Peptidoglycan biosynthesis
plij01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KQP88_20005 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KQP88_20005 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
plij01011
]
KQP88_20005 (murD)
Enzymes [BR:
plij01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
KQP88_20005 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
plij01011
]
Precursor biosynthesis
Amino acid ligase
KQP88_20005 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
QWU82295
LinkDB
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Position
complement(4791020..4792366)
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AA seq
448 aa
AA seq
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MSLIVSDRFRIVVGLGKSGMSLVRFLANRGVAFAVADTRENPPELATLRRDYPQVEVRCG
ELDVEFLCRADELYVSPGLALATPALQEAHARGVKMSGDIDLFARYAKAPIIAITGSNAK
STVTTLVGEMAQAAGKRVAVGGNLGMPALDLLSDDVELYVMELSSFQLETTHELNAEVAT
VLNVSEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDALSRPLIGEGLPCWTFGLTKPD
FNGFGLREENGEKYLAFQFDNLMPVRELKVRGAHNQANALAALALGHAVGLPFDAMLSSL
RAFTGLEHRCQWVRELAGVHYYNDSKATNVGAALAAIEGLGADIAGKLVLIAGGDGKGAD
FSGLRAAVAAHCRAVILLGRDAELIAQALGDAAPLVRVSTLEESVQRSAELAQEGDAVLL
SPACASLDMFKNYEERGRLFAQAVEGLS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtctttgatcgtttccgaccgcttccgtatcgttgtcggtctaggcaagagtggcatg
tccctggttcgcttcctggcgaaccggggcgtcgcctttgccgtggccgatactcgggag
aatcctccggagcttgcgaccttgcgtcgcgactacccgcaggtggaagtgcgttgtggc
gagctggacgtagagtttctctgccgtgccgacgagctgtatgtcagccccggtctggcc
cttgcgactccagccttgcaagaggctcatgcccgtggcgtcaagatgtccggtgatatt
gatctgttcgcgcgttacgcgaaggcgccgatcattgcaatcaccggctccaatgcgaaa
agcaccgtgaccaccctggtgggcgagatggcccaggccgcaggcaagcgcgttgcagtc
ggcggcaacctcggcatgccggcgctggatctgctcagtgacgatgtcgagctgtacgtg
atggagctgtccagctttcagctcgaaaccacccacgaactcaacgccgaagtcgcgacc
gtgttgaacgtcagcgaagaccacatggaccgctacagcggcctgccggcctatcacctg
gccaagcaccggattttccgtggcgcacggcaagtggtcgtcaatcgtcaggacgcactg
tcccggccattgatcggtgaaggtctgccttgctggaccttcggcctgaccaagccggat
ttcaacggtttcggcctgcgtgaagagaacggtgaaaagtacctggccttccagttcgac
aacctgatgccggttcgcgaactgaaagtccgtggcgcacacaatcaggccaatgccctg
gccgcgctggcactggggcatgccgtgggcctgccgttcgacgccatgctgagcagcctg
cgggccttcaccggtcttgagcatcgctgccagtgggtgcgcgagctggcaggtgttcac
tattacaacgactccaaggccaccaacgtgggcgccgcactggcggccatcgaaggcctg
ggtgcggacatcgctggcaagctggtgctgatcgccggtggcgatggcaagggcgctgat
ttcagtggcctgcgtgctgccgtggcggcgcattgccgtgccgtgatcctgctgggtcgc
gatgccgaactgattgctcaggctctgggcgatgcagcaccgctggtgcgtgtctccacg
ctggaagagtccgtgcagcgcagtgccgagctggcacaagagggcgatgcggtattgctg
tcgcctgcctgcgcgagtctcgacatgttcaagaattacgaagagcgcggacgtctgttc
gcccaggcagtggagggcttgtcatga
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