Pseudomonas lijiangensis: KQP88_20050
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Entry
KQP88_20050 CDS
T08713
Symbol
rsmI
Name
(GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
plij
Pseudomonas lijiangensis
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plij03009
]
KQP88_20050 (rsmI)
Enzymes [BR:
plij01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
KQP88_20050 (rsmI)
Ribosome biogenesis [BR:
plij03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
KQP88_20050 (rsmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
DUF4213
Motif
Other DBs
NCBI-ProteinID:
QWU82302
LinkDB
All DBs
Position
complement(4800452..4801324)
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AA seq
290 aa
AA seq
DB search
MTAPVVSNSTLGSLYVVATPIGNLDDMSVRALKVLREVALIAAEDTRHSSRLMQHFGIST
PLAACHEHNERDEGSRFITRLLAGDDVALISDAGTPLISDPGYHLVRQARAAGVQVVPVP
GACALIAALSAAGLPSDRFIFEGFLPAKAVGRKSRLEVLREEPRTLIFYEAPHRILECLQ
DMEQVFGPDRPALLARELTKTFETLKGLPLAQLRAFVEGDSNQQRGECVVLVAGWTPPED
EDVVGAEARRVLDLLLEEMPLKRAAALAAEITGVRKNLLYQVALDKQKDQ
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
ttgactgctccggttgtttcaaattccaccctgggttcgctttatgtagtggcgacccct
atcggcaatctggacgacatgagcgtgcgggccttgaaagtgctgcgtgaagtggcattg
atagccgcagaggatactcgccactcctcacggctgatgcagcattttggaatatccacg
cctctggctgcctgccatgaacataacgaacgtgacgagggtagccgtttcatcacccgt
ctgctggccggtgacgatgttgcgctgatctccgatgcggggacgccgctgatttccgat
cctggctatcaccttgtccgccaggcgcgtgcggcaggtgttcaggtcgttccggtgccg
ggtgcctgcgccctgattgcggccttgtcggcagccggcctgccttcggaccgctttatc
tttgaaggttttctgccagccaaggccgtgggtcgcaagagccggcttgaggtgcttcgc
gaagagcctcgcaccttgatcttctatgaggccccgcaccggattctcgaatgtcttcag
gacatggagcaggtattcggccctgaccgtccagcattgctggcgcgggagctgaccaag
acgtttgaaaccctcaaggggctgccgctggcgcagttgcgtgcctttgtcgagggtgac
agcaatcagcagcggggtgagtgcgtggtgctggtagcgggctggacgccgccggaggat
gaagatgtggtcggtgccgaggcgcgccgggttctggatctgttgctcgaagagatgccg
ctcaagcgcgccgccgcactggcagcggaaatcactggggtacgcaagaatctgctttac
caggtcgcactggacaaacagaaggatcaataa
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