Pseudomonas lijiangensis: KQP88_20660
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Entry
KQP88_20660 CDS
T08713
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
plij
Pseudomonas lijiangensis
Pathway
plij02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KQP88_20660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
plij02022
]
KQP88_20660
02035 Bacterial motility proteins [BR:
plij02035
]
KQP88_20660
Two-component system [BR:
plij02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
KQP88_20660
Bacterial motility proteins [BR:
plij02035
]
Pilus system
Twitching motility proteins
KQP88_20660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_50
Mg_chelatase
HTH_30
Pre_tape_measure
AAA_16
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QWU82416
UniProt:
A0ABX8HP97
LinkDB
All DBs
Position
4935901..4937241
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AA seq
446 aa
AA seq
DB search
MTQRQKILIVDDEPDIRELLEITLGRMKLDTRSARNVTEAREWLAREPFDMCLTDMRLPD
GNGLELVQHIQQAYPQTPVAMITAHGSLDMAIHALKAGAFDFLTKPVDLSRLRELVSSAL
RLQPGAPAERSIDSRLLGNSPPMRALRKQIDKLARSQAPIYISGESGSGKELVARLIHEQ
GPRNDKPFVPVNCGAIPSELMESEFFGHRKGSFTGAHEDKPGLFQAANNGTLFLDEVADL
PLAMQVKLLRAIQEKSIRSVGGQQEQVVDVRILCATHKDLNAEVAAGRFRQDLYYRLNVI
ELRVPPLRERREDIDQLVSSVLQRLAANCGQASARLHPQALETLKSYRFPGNVRELENML
ERAYTLCENDEIHASDLRLAESGTPQEHDGHNLADIDNLEDYLESIERKLILQALEETRW
NRTAAAQRLSLSFRSMRYRLKKLGLD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgacccaacggcaaaagatcctgatagtcgatgatgagccggacattcgtgaactcctg
gagatcaccctcggccgcatgaaactcgacacccgcagcgcccgcaatgtgaccgaggcc
cgcgagtggctggctcgcgagccattcgacatgtgcctgaccgacatgcgcctgcctgac
ggtaatggcctggagctggtgcagcatattcagcaggcttacccacagacgcccgtggcg
atgatcaccgcccatggcagcctggatatggccattcatgcactcaaggccggtgccttc
gacttcctgaccaagccggtggacctgagcaggctgcgtgaactggtcagcagcgccctg
cgcctgcaacccggcgccccggcagaacgcagcatcgacagtcgtctgctgggtaactcc
ccaccgatgcgtgccctgcgcaagcaaatcgacaaactggcgcgcagccaggcgccgatc
tatatcagtggcgaatcgggtagcggcaaggaactggtcgcccggctgattcatgaacaa
ggaccgcgtaacgacaaacctttcgtgccggtcaactgcggggcgattccttcggaattg
atggaaagcgaattcttcggccatcgcaaaggcagctttaccggcgcccatgaagacaag
ccaggcctgtttcaggccgccaataacggcacgctgtttctggatgaagtcgctgacttg
ccgctggccatgcaggtaaaactgctgcgggccatccaggagaaatccatacgcagcgtc
ggcggtcagcaggagcaggtcgtggatgtgcgaattctatgtgccacccacaaggatctg
aacgccgaagtcgctgccggccgcttccggcaggatttgtattaccgcctgaacgttatc
gagctgcgggtaccgccgctgcgtgagcggcgcgaagatatcgatcaactggtaagcagt
gtcctgcaacgtctggccgccaactgcggccaggcctcggcacgcctgcaccctcaggcg
ctggaaaccctgaaaagctaccgcttccccggcaacgttcgcgaactggaaaacatgctg
gagcgtgcttacaccctttgcgaaaacgatgaaatccacgcctcggaccttcgccttgcc
gagtccggcaccccccaggaacacgacggccacaatctggccgatatcgataatctggag
gattacctggaaagcatcgagcgcaaactgatcctgcaagctctggaggaaacccgctgg
aaccggaccgcagcagcgcaacgcctgagcctgtcattcagatcgatgcgttaccggttg
aagaagctggggttggattag
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