Pseudomonas lijiangensis: KQP88_20830
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Entry
KQP88_20830 CDS
T08713
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
plij
Pseudomonas lijiangensis
Pathway
plij00260
Glycine, serine and threonine metabolism
plij00460
Cyanoamino acid metabolism
plij00630
Glyoxylate and dicarboxylate metabolism
plij00670
One carbon pool by folate
plij00680
Methane metabolism
plij01100
Metabolic pathways
plij01110
Biosynthesis of secondary metabolites
plij01120
Microbial metabolism in diverse environments
plij01200
Carbon metabolism
plij01230
Biosynthesis of amino acids
plij01240
Biosynthesis of cofactors
plij04981
Folate transport and metabolism
Module
plij_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KQP88_20830
09102 Energy metabolism
00680 Methane metabolism
KQP88_20830
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KQP88_20830
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
KQP88_20830
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
KQP88_20830
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
KQP88_20830
Enzymes [BR:
plij01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
KQP88_20830
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QWU82448
UniProt:
A0ABX8HQE0
LinkDB
All DBs
Position
4973247..4974500
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AA seq
417 aa
AA seq
DB search
MFSRDLTLAKYDSDLFAAMEQEALRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANSAVYLALLQGGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGIDANGMIDYDEVERLAVEHKPKMIVAGFSAYSQV
LDFARFREIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANADIEKKLNSAVFPGAQGGPLEHVIAAKAVCFKEALQPEFKAYQQQVVKNAKAMAGV
FIERGFDVVSGGTENHLFLLSLIKQDISGKDADAALGRAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKAICAKLPVYGA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgactctcgcgaagtacgactccgatctttttgccgcaatggaa
caggaagccctgcgccaggaagagcacatcgaactgattgcctcggaaaactacaccagc
ccggctgtcatggaggctcagggctcggtcctgaccaacaagtacgctgaaggctatccg
ggcaagcgctactacggtggctgcgagtacgtcgacgtcgttgagcaactggcaatcgac
cgcgccaaagagctgttcggcgctgattacgccaacgtccagccacacgctggctcccag
gcgaactccgctgtttacctggctctgctgcaaggcggcgacaccatcctgggcatgagc
ctggctcacggcggtcacctgacccacggcgccagcgtcagctcctcgggcaagctgtac
aacgccgttcagtacggtatcgatgccaatggcatgatcgactacgacgaagtcgagcgt
ctggctgtcgagcacaagccaaaaatgatcgtggccggtttctctgcctactcccaggtt
ctggacttcgcccgtttccgcgaaatcgctgacaaggtcggtgcctacctgttcgtcgac
atggcccacgtagccggtctggttgccgctggtgtctacccgaacccggttccattcgcc
gacgtggtcaccaccacgacccacaaaaccctgcgcggcccacgcggcggcctgatcctg
gctcgtgccaatgccgacatcgagaagaagctgaactcggcagtattccctggcgcacag
ggcggcccactggagcacgtcatcgcggccaaggctgtctgcttcaaggaagcactgcaa
cctgagttcaaggcctaccagcaacaagtggtcaagaacgccaaggccatggctggcgtg
ttcatcgagcgcggtttcgacgtggtttccggcggtactgaaaaccacctgttcctgctg
tcgctgatcaaacaggacatctccggtaaagacgcagacgccgccctgggccgcgccttc
atcaccgtgaacaagaactccgtcccgaacgacccacgctccccgttcgtcacctccggc
ctgcgcttcggcaccccggcagtgaccactcgcggcttcaaggaagcagagtgcaaggaa
ctggcaggctggatctgcgacatcctggctgacctgaacaacgaagcggtaatcgacgcc
gttcgtgagaaagtgaaagccatctgcgcaaaactgccggtttacggcgcttga
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