Pseudomonas lijiangensis: KQP88_21280
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Entry
KQP88_21280 CDS
T08713
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
plij
Pseudomonas lijiangensis
Pathway
plij00550
Peptidoglycan biosynthesis
plij01100
Metabolic pathways
plij01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KQP88_21280 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KQP88_21280 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
plij01011
]
KQP88_21280 (mrdA)
Enzymes [BR:
plij01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KQP88_21280 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
plij01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
KQP88_21280 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QWU82528
LinkDB
All DBs
Position
complement(5067054..5068949)
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AA seq
631 aa
AA seq
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MPQPIRLKDHEKDARLVRSRVVFGAVAVMLLVCVLIARLYFLQVIQYDYHSTLSENNRVH
VQPIPPSRGLIFDRNGVVVADNRPSFSLSVTRERSGNWSQVLDTIVEVLQLTPDDRIIFE
KRMKQGRRPFEPVPILFELTEEQIALIAVNQFRLPGVEVVAQLVRHYPQGPHFAHSVGYM
GRINEKELKGLDPVNYSGTHHIGKTGIERFYEDELHGQVGYEEVETNARGRVLRVLKRTD
PIPGKDIVLSLDINLQEAAEAALGGRRGAVVALEPNTGEVLAMVSAPSFDPNLFVTGISF
KAYAELRDSIDRPLFNRILRGLYPPGSTIKPAVAIAGLDAGVVTPSSRVFDPGYYQLPNY
DHKYRNWNRTGDGWVDLDVAIMRSNDTYFYDLAHKLGIDRLSSYMNKFGLGQKVSLDMFE
ESPGLMPSRDWKRATRRQAWFPGETLILGIGQGYMQATPLQLAQATALVANKGKWNRPHL
AKSIEGKAPVDENPMPDIILRDPSNWARVNHGMQEVMHGARGTARKASIGAQYRIAGKSG
TAQVVAIKQGEKYDRTKVQERHRDHALFVGFAPADNPKIVVAVMVENGESGSGVAAPVVR
QVMDAWLLDQNGALKPEYAGSLNPEAAAREE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagccgatccgcctaaaagaccatgaaaaagacgcacgccttgtgcgcagcagg
gtcgtgttcggggcagtggccgtcatgttgctggtgtgcgtcctgattgcgcgcctgtat
ttcctgcaagtcattcagtacgactatcactcgaccctgtcggaaaacaaccgggtccat
gtccagccgattccgccgagtcgcggcctgattttcgaccgcaacggcgttgtggtggcc
gacaaccggccaagcttcagcctcagcgtgacccgcgagcgctccggcaactggtcccag
gtgctcgataccatcgtcgaagtgctgcagctcacgcccgatgaccgcatcatcttcgag
aaacgcatgaaacaggggcgtcggccattcgagccggtgccgatcctgttcgagctgacc
gaagagcagattgccctgatcgctgttaaccagttccgcctgcctggcgtcgaagtggtt
gcgcaactggtccgtcactatccccaggggccgcactttgcccactcggtcggttacatg
ggccgcatcaacgagaaagagctcaaaggcctcgatcccgtcaattacagcggcacgcac
catatcggcaagaccggtatcgagcgtttctacgaagacgagctgcatggtcaggtcggt
tacgaagaagtcgaaaccaatgcccggggccgtgtcttgcgtgtgctcaagcgcaccgac
ccgattcccggcaaggacatcgtcctgagcctggacatcaatcttcaggaagccgccgaa
gccgcactgggcggtcgtcgcggtgccgtagtggccctggagccgaataccggtgaggtg
ctggcgatggtcagcgcaccgagtttcgatccgaatctgttcgtgacgggcatcagcttc
aaggcttatgccgagctgcgcgattccatcgaccggccactgttcaaccgtattctgcgc
ggcctttatccgccgggttccaccatcaagccagcggtcgccattgccggtctggatgct
ggcgtcgtgactccgtcttcccgtgtgttcgaccccggctactaccagttgccgaactat
gaccacaaataccgcaactggaaccgcaccggcgatggctgggtggacctcgatgtggcg
atcatgcgttcgaacgacacctatttctacgatctggcgcacaagctcggtatcgatcgg
ctgtccagctacatgaacaagttcggtcttgggcagaaggtgtctctggacatgttcgag
gaatctcccggcctgatgccgtcccgtgactggaaacgggccacccggcgtcaggcgtgg
ttccccggcgaaaccctgattctcgggatcggccagggctatatgcaggccacgccgctg
caactggcgcaggccacggcgctggtcgccaacaagggcaaatggaaccggccgcatctg
gccaagagcatcgaaggcaaggcgccggttgacgagaacccgatgccggacatcatcctg
cgcgacccgtccaactgggccagggtgaaccacggcatgcaggaagtgatgcacggcgcc
cgtggtacggcgcgcaaggcttccatcggtgcgcaataccggatcgccggtaaaagcggt
accgctcaggttgtcgccatcaagcagggtgagaagtacgaccgcaccaaggttcaggag
cgccatcgtgaccacgccttgttcgtgggctttgcgcccgccgacaaccccaagattgtc
gtggctgtgatggtggagaacggtgagtccggctctggcgttgcggctcccgtggttcgt
caggtgatggatgcctggctgctcgaccagaatggcgcactcaagcctgagtacgccggt
tccctgaatccggaggctgcggcccgtgaagagtaa
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