Pseudomonas lijiangensis: KQP88_21535
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Entry
KQP88_21535 CDS
T08713
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
plij
Pseudomonas lijiangensis
Pathway
plij03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KQP88_21535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plij03400
]
KQP88_21535
Enzymes [BR:
plij01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
KQP88_21535
DNA repair and recombination proteins [BR:
plij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
KQP88_21535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Phage_TAC_11
Vps53_N
FH2
Rota_NSP3
Motif
Other DBs
NCBI-ProteinID:
QWU82557
LinkDB
All DBs
Position
5108494..5108736
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AA seq
80 aa
AA seq
DB search
MARKKAALDFEQSLTDLQTLVERLENGELSLEDSLTAFEQGVRLTRDCQNALAQAEQKVQ
VLLERDGELAEEPFEADQPE
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaagaaagctgcactggatttcgaacaatccctcaccgatctgcaaacgctg
gttgagcgtctggagaacggtgagctgtcgttggaagactcattgaccgctttcgagcaa
ggcgtgcgcctcacacgtgactgccagaatgccttggcccaggccgagcagaaggtgcag
gtattgctggagcgcgacggcgaactggccgaagagcccttcgaagcggatcaacccgaa
tga
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