Pseudomonas lijiangensis: KQP88_21735
Help
Entry
KQP88_21735 CDS
T08713
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
plij
Pseudomonas lijiangensis
Pathway
plij03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KQP88_21735 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plij03021
]
KQP88_21735 (rpoA)
03400 DNA repair and recombination proteins [BR:
plij03400
]
KQP88_21735 (rpoA)
Enzymes [BR:
plij01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KQP88_21735 (rpoA)
Transcription machinery [BR:
plij03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KQP88_21735 (rpoA)
DNA repair and recombination proteins [BR:
plij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KQP88_21735 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
QWU82595
UniProt:
A0ABX8HRD4
LinkDB
All DBs
Position
complement(5146373..5147374)
Genome browser
AA seq
333 aa
AA seq
DB search
MQISVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLSKKGSGVVTAADIQLDHD
VEIVNPDHVIANLASNGALNMKLVVARGRGYEPADSRQSDEDESRSIGRLQLDSSFSPVR
RIAYEVQNARVEQRTNLDKLVIDMETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPV
VIEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttcggtaaatgagttcctgacaccccgccacattgatgtgcaggttgtcagt
ccaacccgcgccaagattactctcgagcctctcgagcgtggttttggccataccctgggc
aacgcgcttcgccgcattctgttgtcctccatgcccggctgtgcagtagtcgaggccgag
attgacggtgtactccatgagtacagcgccatcgaaggtgtacaggaagacgtcattgaa
atcctgttgaaccttaaaggtctggctatcaagctgcacggtcgagacgaagttacgctg
accttgtcgaagaagggttcgggggtggttaccgctgccgatattcagctggatcatgat
gtcgagatcgttaatcccgatcacgtaatcgctaacctggcgtctaacggcgccttgaac
atgaagctcgtagtagctcgtggtcgtggttatgaaccggcagactcgcgtcagagcgat
gaagacgaaagccgcagcattggtcgtctgcagcttgactcttcgttcagcccagtacgt
cgcatcgcctacgaggtgcaaaacgcccgtgtcgagcagcgtaccaacctggacaagctg
gttattgatatggaaaccaacggtactctggatcctgaagaggctatacgtcgtgctgca
accattctgcaacagcagttggctgcgttcgtcgacctcaaaggtgacagcgaaccagtg
gtaatcgaacaggaagatgagatcgatccgatcctcctccgtccggttgacgatttggaa
ctgaccgtgcgttcggccaactgccttaaggcggagaacatttactacatcggcgacctg
attcagcgtaccgaagtagaactgttgaagactccgaacctgggcaagaaatccttgacc
gagatcaaggatgtcctggcttctcgtggtctttccctcggcatgcgcctcgacaactgg
ccgcctgcaagtcttaagaaggacgacaaggcgactgcctga
DBGET
integrated database retrieval system
