Pseudomonas lijiangensis: KQP88_22380
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Entry
KQP88_22380 CDS
T08713
Symbol
fis
Name
(GenBank) DNA-binding transcriptional regulator Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
plij
Pseudomonas lijiangensis
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plij03000
]
KQP88_22380 (fis)
03036 Chromosome and associated proteins [BR:
plij03036
]
KQP88_22380 (fis)
03400 DNA repair and recombination proteins [BR:
plij03400
]
KQP88_22380 (fis)
Transcription factors [BR:
plij03000
]
Prokaryotic type
Helix-turn-helix
Other families
KQP88_22380 (fis)
Chromosome and associated proteins [BR:
plij03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
KQP88_22380 (fis)
DNA repair and recombination proteins [BR:
plij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
KQP88_22380 (fis)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
DUF6507
Xre-like-HTH
UPF0175
Motif
Other DBs
NCBI-ProteinID:
QWU82710
LinkDB
All DBs
Position
5258228..5258548
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AA seq
106 aa
AA seq
DB search
MTMMTETLVSGTTPVSDNVNLKQHLNTPSEEGQTLRGSVEKALHNYFAHLEGASVTDVYN
LVLSEVEAPLLESVMNYVKGNQTKASELLGLNRGTLRKKLKQYDLL
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgatgaccgagactttagtgagtggaacaacacccgtgagcgacaacgtcaat
ttgaaacagcacctcaacacgccgagcgaagagggtcagaccctgcgcggcagtgtcgag
aaggcgctgcacaattatttcgcccacctcgaaggcgcttccgtcactgacgtctacaac
ctggtgttgtcggaggtcgaggctccgcttctcgaaagcgtgatgaactacgtcaagggc
aaccagacgaaggcttccgagctgcttgggctcaatcgcggcacgctgcgcaagaaactc
aagcagtacgatctgctttaa
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