Pseudomonas lijiangensis: KQP88_22830
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Entry
KQP88_22830 CDS
T08713
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
plij
Pseudomonas lijiangensis
Pathway
plij03030
DNA replication
plij03430
Mismatch repair
plij03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KQP88_22830
03430 Mismatch repair
KQP88_22830
03440 Homologous recombination
KQP88_22830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plij03032
]
KQP88_22830
03400 DNA repair and recombination proteins [BR:
plij03400
]
KQP88_22830
Enzymes [BR:
plij01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KQP88_22830
DNA replication proteins [BR:
plij03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KQP88_22830
DNA repair and recombination proteins [BR:
plij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KQP88_22830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QWU82792
UniProt:
A0ABX8HQT6
LinkDB
All DBs
Position
5352762..5353475
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AA seq
237 aa
AA seq
DB search
MNLFEWLRPRPKKTPLEQQHLQRLAELPPFAPLSEESLRKQRWVVLDLETSGLNMNRDQV
LSIGAVVIEDGAIDLGQQFERTILRVDHKVSPAVLIHGLAPSTIAAGSEPVEAFLDFLEF
AGSSPMLAFHAPFDQHMLSRALKDSLDYRLQHPFFDVAEIAPMLCPDASFCQAGLDDWTN
FFGLHAEERHHASADALVTAELALILFSHARRQGIDSPARLEESLGQWRRRKQNHSF
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgttcgagtggctacgaccacgcccgaaaaagacgccgctggagcagcagcac
ctgcagcgtctggcagagctgccgcccttcgcgccactgagtgaggagtccttgcgcaag
cagcgctgggtcgtgctggatctggaaaccagcggcctgaacatgaaccgcgatcaggtc
ctgtccatcggtgccgtagtgatcgaagacggggccatcgatctgggccagcagttcgag
cgcaccatcttgcgtgtcgatcacaaggtcagcccggccgtgctgattcatggcctggcg
cccagcaccatcgccgcgggcagcgagccggtggaagcttttctggacttcctggagttc
gcaggctcaagcccgatgctggcgttccatgcaccattcgaccagcacatgctgtcccgt
gccctgaaggacagtctggattatcgcttgcagcatcctttcttcgatgtcgctgaaatc
gccccgatgctctgccccgacgccagcttttgtcaggccgggctggacgactggacgaac
tttttcgggctgcacgccgaagaacgtcaccatgccagcgccgatgcgctggtcacggct
gaactggccctgatcctgttcagccacgcccgccgccagggcatcgacagccctgcacgg
ctggaggaatccctggggcaatggcgcaggcgcaagcagaaccactcgttttaa
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