Pseudomonas lijiangensis: KQP88_23200
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Entry
KQP88_23200 CDS
T08713
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
plij
Pseudomonas lijiangensis
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plij03021
]
KQP88_23200 (rpoH)
Transcription machinery [BR:
plij03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KQP88_23200 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ImpA_N
UCR_14kD
IF2_N
Motif
Other DBs
NCBI-ProteinID:
QWU82859
LinkDB
All DBs
Position
complement(5439788..5440642)
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AA seq
284 aa
AA seq
DB search
MTTSLQPAYALVPGANLEAYVHTVNSIPLLTPEQERELAESLYYDQDLDAARQMVLAHLR
FVVHIARSYSGYGLAQSDLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNDEVHRVAESLGVEPREVREMESRLTGQD
MAFDPASEADDDSAFQSPANYLEDHRYDPARQLEDSDWSDNSTANLHQALDVLDERSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKTSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttctttgcaacctgcatatgcattagtcccgggtgcgaacctggaggcctat
gtgcacacggtgaacagcattcccttgctgacgcctgagcaggagcgtgaactggctgag
agtctctactatgaccaggatctggatgcggctcgtcagatggtcctcgctcacctgcgt
ttcgtcgtacacatcgcacgcagctattcgggttacggtctggcacagtccgacctgatc
caggaaggcaacgttggcctgatgaaggccgtcaaacgcttcaaccccgagatgggcgtg
cgtctggtgtcgtttgccgtgcactggatcaaggcggaaatccacgagttcatcctgcgc
aactggcgtatcgtcaaggtcgccacgaccaaggcgcagcgcaagctgttcttcaatctg
cgcagccagaagaagcgtctggcctggctgaacaacgatgaagtgcatcgcgtggccgaa
agccttggcgtcgagcctcgtgaagtgcgcgagatggaaagccgcctgaccggtcaggat
atggccttcgatccggcctccgaagccgatgatgacagcgcattccagtcgccggccaac
tacctggaagaccatcgctacgatcctgcgcgtcagttggaagattccgactggagcgac
aactccacggccaatctgcatcaggctctggacgtactggacgagcgcagtcgtgacatc
ctctaccagcgctggctggcagaagaaaaagccacgctgcacgacctggcgcagaagtac
aacgtctccgccgagcgtattcgccagctcgagaagagcgcgatgaacaagctcaagacc
tcgatagctgcgtaa
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integrated database retrieval system
