Pseudomonas lijiangensis: KQP88_24690
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Entry
KQP88_24690 CDS
T08713
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plij
Pseudomonas lijiangensis
Pathway
plij03420
Nucleotide excision repair
plij03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KQP88_24690 (uvrD)
03430 Mismatch repair
KQP88_24690 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plij03400
]
KQP88_24690 (uvrD)
Enzymes [BR:
plij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KQP88_24690 (uvrD)
DNA repair and recombination proteins [BR:
plij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KQP88_24690 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
KQP88_24690 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
AAA_22
RHH_1
Motif
Other DBs
NCBI-ProteinID:
QWU83133
LinkDB
All DBs
Position
5765107..5767290
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAASLGRQLVLAGAGSGKTRVLVHRIAWLMQVEQASPHSVL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLVQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPKHIQASGDLFLGTMKSIYEAYE
VACQRAGVIDFSELLLRALDLWRDHPGLLAHYQRRFRHVLVDEFQDTNAVQYAWLRLLAQ
GGDSLMVVGDDDQSIYGWRGAKIENIHQYSSDFPDTEVIRLEQNYRSTASILKAANGLIV
NNSGRLGKELWTDVGDGELINLYAAFNEHDEARYVVETIESALKTGLSRNDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPARGI
GEKTVEAIREHARHTDISMWEAMRQLVANKGLTGRAASALTGFIELIENLSAKVMEMPLH
LMTQTVIEQSGLITYHQQEKGEKGQARVENLEELVSAARNFENNEDDEELTPLAAFLGHA
SLEAGDTQAQEHEDSIQLMTLHSAKGLEFPHVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQQLVITYAETRRLYGSETYNKVSRFVREIPPTLIQEVRLSNSVSRPFGGTQ
KVSNSSLFNGTGIPETQFTLGQHVQHAVFGEGVILNFEGSGAQARVQVNFSEGSKWLMMG
YAKLVPI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctctctccttctcaattccctcaacgatgcccagcgtcaggccgta
gctgcctccctgggtcgtcagttggtcctggccggcgctggttccggcaaaacccgtgtg
ctggtgcatcgcatcgcatggctgatgcaggtcgagcaagcctccccgcattcggtcctg
tcggtgacgtttaccaacaaggccgcagccgagatgcgtcatcgcatcgagcaactgatg
ggcatcagcccggcaggcatgtgggtcggcaccttccacggcctggcacaccgcctgctg
cgagcgcactggcaggaagccgggctggtgcagacgttccagattctggacagcgacgac
cagcagcgtctggtcaagcgcgtgatccgcgagctgggactggacgaacagcgctggccg
gcacgtcaggcacagtggttcatcaacggccagaaagacgaaggcctgcgccccaaacac
atccaggccagcggcgatctgttcctgggcaccatgaagtcgatctacgaagcctatgaa
gtcgcctgccagcgcgccggcgtcatcgacttctccgaactgctgctgcgtgcgctggac
ctctggcgcgatcatcccggcctgctggcgcattaccagcggcgcttccgtcatgttctg
gtggacgaattccaggacaccaacgccgtgcagtacgcctggttgcgactgctggcccag
ggcggcgacagcctcatggtggtgggcgacgacgaccagtccatctatggctggcgtggc
gcgaagatcgagaacattcaccagtactcgtcggacttccccgacaccgaagtcatccgt
ctggagcagaactaccgctcgacggccagcatcctcaaggctgccaacggtctgatcgtc
aacaacagcggtcgcctgggcaaagagctgtggaccgatgtgggcgatggcgagctgatc
aacctgtatgccgccttcaacgaacacgacgaagcgcgctacgtggtcgaaaccattgaa
agcgccttgaagaccggcctgtcgcgcaacgatatcgcaatcctctatcgctccaacgcc
cagtcgcgggtgctggaagaagccttgctgcgcgagcgcattccttatcgcatctacggc
ggccagcgattcttcgagcgtgccgagatcaagaacgccatggcgtatctgcgcctgctg
gaaggccgtggcaacgatgcagcgctggagcgtgtcatcaacgttccagcacggggcatt
ggcgagaagacggtcgaggcgattcgcgagcatgcacgccacaccgacatttccatgtgg
gaagcgatgcgtcagctggtggccaacaaaggcctgaccggccgcgctgccagtgcattg
accgggttcatcgaactgatcgaaaacctttcggccaaggtcatggaaatgcccttgcac
ctgatgacacagaccgtcatcgagcagtcggggctgatcacttatcaccaacaggaaaaa
ggtgagaaaggtcaggcccgggtggaaaaccttgaggaactggtcagcgctgcgcgcaac
ttcgagaacaatgaagatgacgaagagctgaccccgctggcggccttcctcggccatgcg
tcactcgaagcgggcgacacccaggctcaggagcacgaagacagcattcagctcatgacc
ctgcacagcgccaagggcctggaattccctcatgtgttcctggtgggcatggaagaaggg
ctgttcccgcacaagatgagcctggaagagccgggccgtctggaagaggaacgccgcctg
gcctacgtcggcatcacccgcgccatgcaacagctggtgatcacctacgcagaaacccgt
cgcctgtatggcagcgagacctacaacaaggtgtcccgtttcgttcgcgagattccgccg
accctgatccaggaagtgcgcctgtccaatagcgtcagccgtcctttcggtggtacccag
aaagtcagcaacagcagcctgttcaatggcaccggcatccccgaaacccagttcacgctg
ggccagcacgtgcagcacgccgtattcggtgaaggcgtgatcctgaacttcgaaggctcc
ggcgcccaggccagggtgcaggtcaacttctccgaaggcagcaagtggctgatgatgggt
tatgcgaagctggtgcccatctaa
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