Candidatus Planktophila limnetica: PHILAsVB114_00035
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Entry
PHILAsVB114_00035 CDS
T05067
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
plim
Candidatus Planktophila limnetica
Brite
KEGG Orthology (KO) [BR:
plim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plim03032
]
PHILAsVB114_00035
03400 DNA repair and recombination proteins [BR:
plim03400
]
PHILAsVB114_00035
Enzymes [BR:
plim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PHILAsVB114_00035
DNA replication proteins [BR:
plim03032
]
Prokaryotic type
DNA Topoisomerases
PHILAsVB114_00035
DNA repair and recombination proteins [BR:
plim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PHILAsVB114_00035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FaeA
SIS
DUF3419
Motif
Other DBs
NCBI-ProteinID:
ASY27098
UniProt:
A0A249LDA7
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Position
6645..9137
Genome browser
AA seq
830 aa
AA seq
DB search
MDDLTNKPDFDRIEKVDLQVEMARSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMYDA
GYRPDKGYYKSSRIVGDVMGNYHPHGDTAIYDSVVRLAQPWSLRYPLVDGNGNFGSPGND
PAAAMRYTEARLAPLAMEMMRDIDEDTVNFSPNYDGRSQEPDVLPSRLPNLLVNGSAGIA
VGMATNIPPHNLREICEGVIYALENPELASDQLLKHLLTVVKGPDFPTKALIVGRTGIEE
AYRTGRGSIMMRAVVLVEEINKRTCLVVTELPYQVNPDNLALKIAELVKDGKIKGIADVR
DEGNERLGQRLVIVLQNTAIPKVVLNNLYKQTQLQDTFGANMLALVDGVPRTLRLDEFIR
YYIEHQVEVIVRRTKFRLAEKEKRAHILLGYLKALDALDAVIALIRASTTPEEARTGLMK
LLDVDEIQANAILDMQLRRIAALERQKINDEYDGLMKDIVELNAILISPEKQREIIKTEL
SELVAKYGDERRTQIVASEGDFSAEDLIPDQDVVVTITHGGYSKRTVADLYRSQRRGGRG
VKGAALKQDDVVDHFFVASTHDWLLFFTNQGRVYRAKVHELPDAGRDARGQHVANLMAFK
QDEQIAQVLSLKDYQAAPYLVLATKSGLVKKTPLVEYDSPRTGGLIAISLKGSDEVVSAS
LVNKGDELLLVSKKGMSLRFTADDESLRPMGRSTSGVIGMKFRAGDELLAMARVNSQLEG
NSFVFTATDGGYGKKTPIDEYRLQGRGGIGIKAAKIDEDSRGSLVSALVLQNDDEVLAIT
SAGTVMRTPAAEVRQTGRDSMGVRLVNLDEGALLLSVTKNSEDEIPAKDV
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctaacaaacaaaccagattttgatcgcattgaaaaagtcgatctacaagtt
gagatggcgcgttcatatcttgactatgcaatgtcagttatcgtcggtcgagcacttcca
gatgttcgagatggattaaagccagtacaccgtcgcgttttgtatgcaatgtatgacgct
ggttaccgaccagataaaggttattacaaatcttctcgcatcgttggtgacgttatgggc
aattaccacccacatggtgacacagcgatttatgactctgtagttcgtttagcccaacca
tggtcacttcgttatccactcgtagatggaaacggaaacttcggttctcccggcaacgat
ccagctgctgcaatgcgttatacagaagcgcgtttagccccacttgcaatggagatgatg
cgcgatatcgatgaagacacagttaatttttcaccaaactatgacggccgttcacaagag
ccagatgtattgccatctcgtttaccaaacttattagtcaatggttctgcaggtatcgca
gttggaatggctacaaatattccaccgcataaccttcgtgaaatctgcgaaggtgttatc
tacgcccttgaaaacccagagcttgcatcggatcaattactcaaacacttattaacagtt
gttaaaggtccagattttccaacaaaggcactcattgttggacgcaccggaatagaagag
gcctatcgcacaggtcgcggttcaatcatgatgcgcgcagttgtattggttgaagagatt
aataagcgcacatgtttagtcgtcacagaacttccatatcaagtcaacccagataacctt
gcgttaaaaattgccgaattagtaaaagatggaaagataaaaggaattgcagatgttcga
gacgaaggtaatgaacgtctaggtcaacgccttgttattgtcttgcaaaacacagctatt
cctaaagtagttcttaataacctatacaaacaaacacaattacaagacacatttggcgcc
aacatgttggcactagtcgatggcgttccacgcacactacgactagatgaattcattcgt
tactacatcgagcaccaggtagaagtaattgttcgtcgcacaaaatttcgcttggcagaa
aaagaaaaacgagcacatattttgctcggttatctcaaagcgttggatgcactcgatgcc
gtaattgccttgattcgcgcaagcacaacaccagaagaagcacgcaccgggttgatgaaa
cttctagatgtcgatgaaattcaagccaacgcaattttagatatgcagttgcgtcgcatc
gcagcccttgagcgtcaaaagatcaatgatgagtacgacggtttaatgaaagacattgtc
gaactcaatgcaatcttaattagccctgaaaagcagcgcgaaataatcaaaacagagctc
tcagaactagttgcgaaatacggtgatgagcgccgcacgcaaatagttgcaagcgaaggt
gatttctctgcagaagatttaattcctgaccaagatgtagttgtcacaattacacacggt
ggttactcaaagcgcacagttgctgatttatatagatcacaacgccgtggtggccgaggt
gtaaagggtgcggcgcttaaacaagacgatgttgttgaccacttctttgtcgcgtccact
catgactggttgctctttttcacaaaccaaggtcgtgtgtatcgcgcaaaagttcacgaa
ttaccagatgctggtcgcgatgctcgcggacaacacgttgcaaacttgatggcatttaaa
caagatgaacaaattgcacaagttctttctcttaaagattatcaagctgccccgtattta
gttcttgcaactaagagcggactcgttaagaaaaccccactagttgaatatgactcacct
cgcaccggtggacttattgcaatttcacttaaaggtagcgatgaagttgttagcgcatcc
cttgtgaataaaggcgatgaacttttattagtttctaaaaaaggcatgtcacttcgtttt
actgcagatgatgaatcactacgaccaatgggtcgttccacaagtggtgtcatcggaatg
aaattccgcgcaggagatgaactacttgcaatggcgcgtgttaattcacaacttgaagga
aactcatttgtatttactgcaacagatggtggttatggaaagaaaacaccaattgatgaa
tatcgcttacaaggtcgcggcggcattggaattaaagcggcaaaaatcgatgaagattca
cgaggatcacttgttagcgcacttgtattgcaaaatgatgatgaagttctagcaatcaca
tctgcaggaacagtgatgcgaacacctgctgcagaagtacgccaaacaggccgtgattca
atgggtgtgcgcctagttaaccttgatgagggcgcacttctgctctcagtgactaagaac
agcgaggatgaaatacccgctaaagatgtgtag
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