Candidatus Planktophila limnetica: PHILAsVB114_00110
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Entry
PHILAsVB114_00110 CDS
T05067
Name
(GenBank) succinate dehydrogenase / fumarate reductase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
plim
Candidatus Planktophila limnetica
Pathway
plim00020
Citrate cycle (TCA cycle)
plim00190
Oxidative phosphorylation
plim00650
Butanoate metabolism
plim00720
Other carbon fixation pathways
plim01100
Metabolic pathways
plim01110
Biosynthesis of secondary metabolites
plim01120
Microbial metabolism in diverse environments
plim01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
plim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PHILAsVB114_00110
00650 Butanoate metabolism
PHILAsVB114_00110
09102 Energy metabolism
00190 Oxidative phosphorylation
PHILAsVB114_00110
00720 Other carbon fixation pathways
PHILAsVB114_00110
Enzymes [BR:
plim01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PHILAsVB114_00110
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
DAO
Thi4
GIDA
Lycopene_cycl
FAD_oxidored
Pyr_redox_3
FAD_binding_3
AlaDh_PNT_C
NAD_binding_7
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
ASY27108
UniProt:
A0A249LDB6
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Position
18482..20365
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AA seq
627 aa
AA seq
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MTNLERHSYDVVVIGAGGAGLRAAVEAREAGLRVAIICKSLFGKAHTVMAEGGAAASMGN
VNDKDNWQVHFRDTMRGGKFLNHYKMAELHAKEAPDRIWELEQWGALFDRTSEGKISQRN
FGGHEYPRLAHVGDRTGLELIRTMQQRIVALQQKDGKTYQSMESHLKVFAELTVTEILKE
DGKIAGVYGYWRESGAEVLFEAPTVIIATGGVGKTFKITSNSWEGTGDGHALALKAGANL
VDMEFLQFHPTGMVWPPSVRGILVTESVRGEGGVLTNTNGERFMFKYIPDVFKDKYADNE
EEADRWYADQDNNRRPPELLPRDEVARAINTEVKAGRGTEHGGVFLDVSKRLTAEVIKKR
LPSMWHQFYELAGVDITKEAMEVGPTCHYVMGGVEVEADTAAAVGVPGLFAAGEVAGGMH
GSNRLGGNSLSDLLVFGRRAGMGAAEYVKSAKPVAVSEAAIKAAAERIQAPFNRSGGENS
YSLHAELQEITHNLVGIIRTGSELTEAITKIAEIRKRSANVSVAGDRKFNPGFHLAFDLD
NMLLVAESTAKSAISREESRGGHTRDDFPQLDNKWRQINHIASFDGKEVSVRKQALPAIP
KELFDLFDIHELEKYMTPDEIAKGGAR
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacctcgaacgccactcatatgacgtagttgtcattggcgcgggcggcgccggt
cttcgtgctgcggtagaagcacgtgaagctggtttgcgcgttgcaattatttgcaaatct
ctctttggaaaagctcacaccgttatggcagaaggtggcgctgctgcttctatgggaaat
gtaaacgataaagacaattggcaggttcactttcgcgacacaatgcgcggtggaaaattc
cttaaccattacaaaatggctgaattacacgccaaagaagcaccagatcgcatttgggaa
ctagaacaatggggcgcactctttgatcgcacctcagaaggaaaaattagtcaacgtaac
tttggcggacatgaatatccacgtcttgcgcacgtgggagatcgcacaggtctagaactt
attcgcacaatgcaacaacgcatcgttgcgctgcaacaaaaagatggtaagacatatcaa
tcaatggagagccacctaaaagtatttgcagaactaacagttactgaaattttaaaagaa
gatggaaaaattgcaggtgtctacggatactggcgcgaaagtggtgccgaagttttattt
gaagcccctacagtaattattgcaactggtggtgttggaaagacatttaaaattacatct
aactcctgggagggcacaggagatggtcacgcacttgcacttaaagcaggagcaaacctt
gttgatatggagttcttacaatttcacccaacaggcatggtctggccaccatctgttcgc
ggaattttagttactgaatctgttcgtggtgaaggcggagttctaaccaacaccaacggt
gaacgctttatgtttaagtacattccagatgtatttaaagataagtatgccgataatgaa
gaagaagccgatcgttggtatgcggatcaagataacaaccgccgtccaccagagttattg
ccacgcgatgaagttgctcgcgcaattaacactgaagttaaagcaggacgcggcacagag
cacggtggagtattcctcgatgtttcaaagcgcctcactgcagaagtaattaagaagcgc
ttgccatctatgtggcaccagttctatgaattagctggagtggacattacaaaagaggca
atggaagttggtccaacgtgtcactacgtaatgggcggtgttgaagtagaagcagatact
gcagcagcagtgggtgttcctggtttatttgcagcaggtgaagttgctggcggaatgcac
ggttccaatcgccttggtggcaattcactttctgacttacttgtatttggtcgtcgcgca
ggtatgggcgccgcggagtatgtaaagagtgcaaaacctgttgcagtaagtgaggcagca
ataaaagctgcagcagagcgcattcaagcgccatttaatcgcagtggtggcgagaactct
tattcattacacgccgaacttcaggaaattacacataaccttgttggaattattcgcaca
ggctctgaactcacagaggcaattacaaaaattgcagagattagaaaacgcagtgcaaat
gtttcagtcgccggcgatcgtaaatttaatcctggcttccaccttgccttcgatctagac
aatatgttgctagttgctgagagcacagcaaagtctgcaatctctcgtgaagagtctcgc
ggtggtcacacacgagatgacttcccacaactagataacaagtggcgccagataaatcac
attgcatcctttgacggcaaagaagtaagcgttcgcaaacaagcacttccagctattcct
aaagaactctttgacctctttgatattcatgaattagagaagtacatgacaccggatgaa
atcgcgaaaggcggtgcacgctaa
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