Candidatus Planktophila limnetica: PHILAsVB114_00790
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Entry
PHILAsVB114_00790 CDS
T05067
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
plim
Candidatus Planktophila limnetica
Pathway
plim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PHILAsVB114_00790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plim03019
]
PHILAsVB114_00790
03110 Chaperones and folding catalysts [BR:
plim03110
]
PHILAsVB114_00790
03029 Mitochondrial biogenesis [BR:
plim03029
]
PHILAsVB114_00790
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plim04147
]
PHILAsVB114_00790
Enzymes [BR:
plim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PHILAsVB114_00790
Messenger RNA biogenesis [BR:
plim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PHILAsVB114_00790
Chaperones and folding catalysts [BR:
plim03110
]
Heat shock proteins
HSP60 / Chaperonin
PHILAsVB114_00790
Mitochondrial biogenesis [BR:
plim03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PHILAsVB114_00790
Exosome [BR:
plim04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PHILAsVB114_00790
Exosomal proteins of other body fluids (saliva and urine)
PHILAsVB114_00790
Exosomal proteins of breast cancer cells
PHILAsVB114_00790
Exosomal proteins of colorectal cancer cells
PHILAsVB114_00790
Exosomal proteins of bladder cancer cells
PHILAsVB114_00790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
ASY27227
UniProt:
A0A249LE08
LinkDB
All DBs
Position
143835..145457
Genome browser
AA seq
540 aa
AA seq
DB search
MAKQIAFNEEARRGLERGMNVLADAVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LDDPWEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGSNPMALKRGIE
KAVAAIVTELGSMAKNVETKEQIAATASISAADATIGEMIAEAMDKVGKEGVITVEESNT
FGLELELTEGMRFDKGYISPYFVTDQDRMEVVLEDAYVLLVNSKITNIKDLVPVLEKVMQ
SGKPLAIIAEDVEGEALATLVVNKIRGIFRSAAVKAPGFGDRRKAMLQDIAILTGATVIS
EEVGLKLDQAGVELLGRARKVVISKEETTIIEGGGDDAQIKGRVAQIRSEIEKSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
ATAAFAKLKLEGDEATGAKIVEVSIEAPLKQIAINAGLEGGVVVEKVRNLTAGHGLNAAT
GEYVDMIKAGIIDPAKVTRSALQNAASIAALFITTEAVITDKPEKTPAAPAGPGGGDMDF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcagattgcttttaacgaagaagcacgtcgtgggctagagcgcggaatgaac
gtgcttgcagatgcagtcaaggtaacccttggacctcgtggacgtaacgtggttctggag
aaaaaatggggcgcaccaacaattaccaacgatggcgtttcaatcgctaaagagatcgaa
cttgatgatccatgggaaaaaattggcgcagagctagttaaggaagttgctaagaagaca
gatgatgtcgctggcgacggaacaacaacagccacagtgctggcacaagcacttgttcgc
gaaggtctgcgtaacgttgctgcgggatcaaatccaatggcgcttaagcgcggtatcgaa
aaggcagtagcagcaatcgtgactgagcttggatcaatggcgaaaaacgttgagacaaaa
gagcagattgcagcaacagcttctatctcagccgcagatgccactatcggtgaaatgatc
gctgaagcaatggacaaggttggcaaagaaggcgttattactgttgaagagtcaaatact
tttggactcgaactcgaactcacagaaggtatgcgctttgataagggctatatctctcca
tactttgtaacagatcaagatcgtatggaagttgttctagaagatgcatatgtgcttcta
gttaactcaaagatcacaaacattaaggatctagttccggtccttgaaaaagttatgcaa
tcaggtaagccacttgcaatcatcgccgaagatgttgaaggcgaagcacttgcaacgttg
gtagtaaataagattcgcggaattttccgctctgcagcagttaaggcacctggctttgga
gatcgtcgcaaggcgatgcttcaagacattgcaattttaactggagcaacagttatctct
gaagaagttgggctcaagcttgatcaagcaggagtagagcttctaggtcgcgctcgcaag
gttgttatctccaaagaagagacgacaattattgaaggtggcggagacgacgctcaaatt
aagggccgcgttgcacagattcgttcagagattgaaaagagcgattcagattacgatcgt
gaaaaactacaagagcgtcttgcaaaacttgctggtggagttgcagttattaaagctgga
gctgcaacagaagtagaacttaaagagcgcaagcaccgcattgaagatgcagttcgcaat
gcaaaggctgcagttgaagaaggcatcgttgccggtggtggcgttgcactattgcaagca
gcaacagcagcatttgcaaaattaaaattagaaggcgatgaagcaactggtgcaaagatt
gtagaagtttcaatcgaagcacctcttaagcaaatcgctataaacgctggccttgaaggc
ggagtagttgttgaaaaagttcgtaacctcacagcaggtcatggactcaatgcagcaact
ggtgaatacgttgacatgattaaagctggcatcatcgatccagcaaaggtgacacgttct
gcacttcaaaatgcagcttcgattgccgcactatttattacaacagaagcagtaattacc
gataagccagagaaaacacctgcagcacctgcaggtcctggcggcggagatatggacttc
taa
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