Candidatus Planktophila limnetica: PHILAsVB114_01235
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Entry
PHILAsVB114_01235 CDS
T05067
Name
(GenBank) small subunit ribosomal protein S3
KO
K02982
small subunit ribosomal protein S3
Organism
plim
Candidatus Planktophila limnetica
Pathway
plim03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
plim00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
PHILAsVB114_01235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
plim03011
]
PHILAsVB114_01235
Ribosome [BR:
plim03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
PHILAsVB114_01235
Bacteria
PHILAsVB114_01235
Archaea
PHILAsVB114_01235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S3_C
KH_2
VAR1
KH_KhpA-B
M60-like_N
Motif
Other DBs
NCBI-ProteinID:
ASY27302
UniProt:
A0A249LDW8
LinkDB
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Position
228624..229442
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AA seq
272 aa
AA seq
DB search
MGQKVNPHGFRLGITTEFKSRWYADKLYKDYVKEDVEIRRLMQKGMERAGVSRIEIERTR
DRVRIDLYTARPGIVIGRRGQEADLLRQRLEKLTGKQVQLNILEVKNPEIDAQLVAQGIA
EQLAARVSFRRAMRKSMQTAMKAGAQGIRVQCGGRLGGAEMSRSEFYREGRVPLHTLRAD
IDYGFYEAHTTFGRLGVKVWIYKGEVIQSRTERAAEALAAARAPKPERRGPRTPRAPRGE
VTRSNVNDAAPVSDSAVATLEAPVAGSEGGEA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaaaagtaaacccacacggcttccgtcttggaattaccactgagttcaaatca
cgttggtatgcagacaagttgtacaaggattatgtaaaagaggacgttgaaattcgtcgt
cttatgcaaaagggcatggagcgcgcaggcgtttcacgcatcgaaatcgagcgcacacgc
gatcgtgttcgtatcgacctttacacagcgcgtccaggaattgttattggtcgtcgcgga
caagaagcagatcttcttcgtcaacgtcttgagaagttaactggcaagcaagttcagtta
aacattcttgaagttaaaaaccctgaaattgatgcacaacttgttgcacaaggaattgca
gagcagttagctgctcgtgtttctttccgtcgtgcaatgcgtaagtcaatgcagacagcg
atgaaagctggagcacaaggtattcgtgttcagtgcggtggacgtcttggtggagcagaa
atgtctcgctcagagttctatcgtgaaggccgcgttcctttgcacacacttcgtgcagat
attgattacggtttctacgaagcgcacacaacatttggtcgtcttggcgtaaaggtctgg
atctacaagggtgaagtaattcaatctcgtacagaacgcgctgctgaagcacttgctgca
gcgcgcgctccaaaaccagagcgtcgcggacctcgcaccccacgtgcaccacgcggtgaa
gtaacacgttctaatgtcaacgatgcagctcctgtttcagattcagcagttgcaactctt
gaagcaccagttgctggtagcgaaggaggcgaggcataa
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