Candidatus Planktophila limnetica: PHILAsVB114_01700
Help
Entry
PHILAsVB114_01700 CDS
T05067
Name
(GenBank) stage II sporulation protein D
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
plim
Candidatus Planktophila limnetica
Brite
KEGG Orthology (KO) [BR:
plim00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
plim01011
]
PHILAsVB114_01700
Enzymes [BR:
plim01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PHILAsVB114_01700
Peptidoglycan biosynthesis and degradation proteins [BR:
plim01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PHILAsVB114_01700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
Motif
Other DBs
NCBI-ProteinID:
ASY28339
UniProt:
A0A249LHD7
LinkDB
All DBs
Position
310750..311991
Genome browser
AA seq
413 aa
AA seq
DB search
MSKTLLVIFTLLLSITPAKAIEVPATFNFQGTGYGHGVGLSQIGARGKALAGESANSILS
YYYSGTQIVSLSDNQNIRVNIGHLLPQATLKSGVQGSVLNLYVGDVGEDLLAIPAASLTS
KSGISFIQQGSKVSAYIVTGKNSQLIGTSPTWSTRWSGTRYLEGAPSTVSLKVNSKSVKY
RYGQIQVKSVKAPIIGHRMEITNTVRIHDEYLFGISEVPSSWPTQALIAQGIASRSYALS
KVGIPKRACDCNVYNNISDQAFVGISKEIEPIYGPMWKAAVQASSTSESTGEVITLNNLP
ITAFFTSSSGGQTETSVNAWGQERSFTTSVADPYSQDPVLNPRFFTWNRALDQAILAKAF
LLIDVVSLSINSRNTTGTVATITATSSDGKTSTLRGETFRSRTQLPSAWFNLI
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atttctaaaaccctcttagtaatctttacactcctgctttcgattactcctgccaaagca
attgaagttccagcaacatttaattttcaaggaaccggatatgggcatggagtgggttta
agccaaatcggagcacgcggtaaagcactagctggagaatcagcgaattcaatactttca
tattattactctggtactcagattgtttcgctctccgataatcagaacattcgggtcaac
attgggcacttgctgccacaagcaacacttaagtctggtgtccaaggttctgtacttaat
ctatatgtaggcgatgttggcgaagacctccttgcaattcccgccgcatctctcacatca
aaatctggtatttcatttattcaacaaggctcgaaagtttctgcctatattgttacggga
aaaaactctcaactaattggaacaagtccaacatggagtactcgttggtcaggcacgcgt
tatttggaaggtgcgccatcaactgtttcattaaaagtaaattcaaagagcgtgaaatac
agatacggccaaattcaagttaaatccgtgaaagcaccaataattggtcacagaatggaa
atcacaaacactgttcgaattcatgatgagtatctctttggaatcagtgaagttccttca
tcgtggccaacgcaagctttaattgcgcagggcatcgcttctaggtcctatgcattaagt
aaagttggaataccaaagcgagcgtgtgactgtaatgtctataacaatatttcagatcaa
gcatttgtaggtatttcaaaagaaatcgaacccatttatgggccaatgtggaaagccgct
gtccaagctagctcgacatctgaaagtacaggcgaagtgattacattaaataacttacct
atcacggcgttttttacctcatctagtggagggcaaacagaaacaagtgtgaacgcatgg
ggccaagaaagaagttttactactagcgttgccgatccttatagccaagaccctgtactt
aaccctcggtttttcacatggaatcgtgccttagatcaggcaattcttgcaaaagcattc
ttactcatagatgttgtctcactaagcattaattctcgaaataccaccggaactgttgcc
acaattacagcaacatctagcgatggaaaaacttctacattacgtggagaaacttttaga
agcagaacgcaattgccatctgcatggtttaacttaatttaa
DBGET
integrated database retrieval system
