Candidatus Planktophila limnetica: PHILAsVB114_01790
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Entry
PHILAsVB114_01790 CDS
T05067
Name
(GenBank) ATP-dependent RNA helicase RhlE
Organism
plim
Candidatus Planktophila limnetica
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
zf-CCHC_3
Motif
Other DBs
NCBI-ProteinID:
ASY27406
UniProt:
A0A249LEP9
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Position
complement(324848..326158)
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AA seq
436 aa
AA seq
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MSLTFEDLPLRQETKAALKEHGFASPFPIQEMVLPIALADGDVIGQAKTGTGKTLAFGIP
LIERVIAPNDSEWQGLEHKGAPQVLVVVPTRELCIQVAKDIDELANNRGIRTLAVYGGRA
FEPQIDSLSAGIEIVVGTPGRLLDLYRQGHLKLKEVSRLVLDEADEMLDLGFLPDVEKIF
TSTPKRSQTMLFSATMPGDILSLARRFMNQPIHIRTQDNEDEGAVVSKIEQHVYRAHAMD
KIEMLARILQADGRGPTIVFCRTKRTCQKTADDLLERGFRSATIHGDLAQTAREKALNDF
KAGKTDVLVATDVAARGIDIDGITHVINYQCPEDEKTYVHRIGRTARAGAHGIAVTFVDW
DELARWKMIDMALKLGLPEPEETYSSSEHLYEVMKIPAGSNGRMVKAKTVKVDAPPKVER
MTEKRERTRTKKFKND
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
gtgtcactaactttcgaagaccttccacttcgccaagaaacaaaggctgctcttaaggag
catggttttgcttcgccttttcccatccaggaaatggttttaccaattgcgctcgcagat
ggtgatgtcattggccaagccaaaactggtactggaaaaacacttgcatttggtatccct
ctgattgaacgagtcatcgcaccaaatgactcagagtggcaaggactggaacataaaggt
gcacctcaagtattagttgttgtacccactcgcgaactatgtattcaagttgcaaaagac
attgatgaattagcaaataatcgtggaattagaacgttagccgtctacggcggacgagca
ttcgaaccacaaatagattcactcagcgcaggtatcgaaattgttgttggcactcctgga
cgactattagacctatatcgccaaggacaccttaaactcaaagaagtttcacgacttgtc
ttagatgaagcagatgagatgctcgaccttggtttcttgccagatgttgaaaagattttt
acaagcacaccaaaacgttcgcaaacaatgcttttttcagcgactatgcctggagatatt
ctgagccttgcacgccgatttatgaatcaaccaattcacattcgcacgcaagataatgaa
gatgaaggcgctgtagtttcaaaaattgagcagcatgtttatcgtgcacatgcaatggat
aaaattgagatgttggcacgaatcctgcaagcagatggtcgtggtcccacaatcgttttt
tgtcgcactaaacgaacatgccaaaagacagcagatgatctactcgaacgaggatttaga
tctgcgaccattcatggagatcttgctcaaactgcccgagagaaagcactcaatgacttc
aaggcgggtaaaacagatgtgcttgttgctaccgatgttgcggcgcgcggaattgatatt
gatggaattactcacgtaattaattatcagtgcccagaggacgagaaaacatacgttcat
agaattggacgtactgcacgtgcaggcgcccacggaatcgcagtcacttttgttgattgg
gacgaattggctcgctggaagatgattgatatggctctcaagcttggtttaccagaacca
gaagaaacatactcatcttcagaacatctctatgaagtaatgaaaattcctgctggctca
aatgggcgaatggttaaagcaaaaactgtaaaggttgatgcaccacctaaagttgaacgg
atgacggaaaaacgtgaacgtactcgaactaagaaatttaaaaatgattaa
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