Candidatus Planktophila limnetica: PHILAsVB114_02440
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Entry
PHILAsVB114_02440 CDS
T05067
Name
(GenBank) tRNA pseudouridine55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
plim
Candidatus Planktophila limnetica
Brite
KEGG Orthology (KO) [BR:
plim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plim03016
]
PHILAsVB114_02440
Enzymes [BR:
plim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PHILAsVB114_02440
Transfer RNA biogenesis [BR:
plim03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PHILAsVB114_02440
Prokaryotic type
PHILAsVB114_02440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Methyltransf_8
Motif
Other DBs
NCBI-ProteinID:
ASY27520
UniProt:
A0A249LEH4
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All DBs
Position
454651..455541
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AA seq
296 aa
AA seq
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MSTTDGFVVVDKAGAMTSHDVVSVGRRVLGTRKVGHAGTLDPMATGILILGFGHGTRLLQ
YITDGDKSYRATISLGAATVTDDVEGEVISRASASDLLKVTDEEIKKVLSEMRGVISQRP
SSVSAVKVDGKRAHERVRAGEVFELASREVTISQLDVTQIRRSEKAIEIDIEVTCSAGTF
IRAIARDLGNVLNVGGHLTVLRRTRVASFGEDVATPFEDFKSGQFKSLGLVEVARRIFQV
REIDLVESQELSFGRKISASPSAQIYAAISESNELIALLENREDGAKPIAVFAPAN
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaacagatgggtttgtagttgtagataaagctggcgcaatgacaagtcatgat
gttgtatctgttgggcgacgcgtattgggtacacgtaaagttggacacgctgggacattg
gatccaatggcaactggcatattaattcttgggtttggtcacggaactagattgcttcaa
tacatcaccgatggtgataagtcctatagagcaaccatttcactcggggccgcaaccgta
actgatgatgtcgaaggcgaagtaatttctcgagctagtgcttcagatttattgaaagtc
actgatgaagaaatcaaaaaggttctatccgaaatgcggggtgtcatttctcaacgtccg
agttctgtctctgcagttaaagtagatggaaagcgtgcacatgagcgagtaagagcgggt
gaagtatttgagttggcatcgcgcgaagtaactatttcgcaattagatgttacgcaaatt
cgccgcagtgaaaaagctattgaaattgatattgaagtaacgtgctcagccggaacattt
attagagctattgctcgtgatttaggaaatgtactaaacgttgggggacatctgacggtt
ctgcgccgcaccagagtggcatcctttggcgaagatgtagccacgccatttgaggatttt
aaatctggccaatttaagtctttgggattagttgaagttgcacggagaatttttcaggtt
cgtgagattgatttagttgagtcccaagaactatcttttggacgcaaaatttctgcttca
cctagtgcgcagatttatgctgctatctccgagtccaatgaattaattgcgttgctggaa
aatcgagaagatggagcaaaaccaattgcagttttcgctcctgcgaattga
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