Candidatus Planktophila limnetica: PHILAsVB114_02510
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Entry
PHILAsVB114_02510 CDS
T05067
Name
(GenBank) endonuclease VIII
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
plim
Candidatus Planktophila limnetica
Brite
KEGG Orthology (KO) [BR:
plim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plim03009
]
PHILAsVB114_02510
Enzymes [BR:
plim01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PHILAsVB114_02510
Ribosome biogenesis [BR:
plim03009
]
Prokaryotic type
ribosomal protein modification factors
PHILAsVB114_02510
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Mur_ligase_C
DUF3079
SH3_18
Motif
Other DBs
NCBI-ProteinID:
ASY27534
UniProt:
A0A249LF20
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All DBs
Position
469139..470521
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AA seq
460 aa
AA seq
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MSRTVAVVTLGCARNEVDSEELAGRLAADGWILVDDVEKAEVALINTCGFIESAKKDSVD
ALLEANSLKGHGVTRAVVAVGCMAERYGQELAEALPEADAILGFDDYKDISARLQSIVSG
NSHTPHVPRDRRSLLPIAPVDRAAVRDEQYASKVGAGGTLFRKRLGNAPWAPLKIASGCD
RRCSFCAIPYFRGSFVSRRPVEILEEATWLASNGVSELFLVSENTTSYGKDLGDLRLMET
ILPDIAAISGVERVRLSYLQPAEMRPSLLQAMVATDKVAPYFDLSFQHTSPSVLRAMRRF
GDSEKFLHLISQIRALDPQAGIRSNFIVGFPGETQEDFDGLAEFITHAQLDAVGIFGYSD
EDNTEALSLGEKLEAEVISQRVETLSTLADEMVSERAQKRVGQSVRVLIEDAELQEGRAA
HQGPEVDGTTTFVGTDYKVGEYVDGVVIESIGADLVARAQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcacagttgcagtagtcaccctgggctgtgctcgtaatgaagtggattccgaa
gagttagctggtcgtttagcagccgatggatggatcctggttgacgatgttgaaaaagcc
gaagtggcgctaatcaatacatgtgggtttattgaatctgcaaagaaagactctgtcgat
gcgcttcttgaagctaattcactcaaaggccatggagtaacgcgcgctgttgtagcagtt
gggtgcatggctgagcgatatgggcaagaactagccgaagcactcccagaggcagatgca
attttaggatttgatgattacaaagatatctctgcgcgattgcaatcaattgtttcagga
aattctcacaccccgcatgtgcctcgtgatcgcaggtcattacttccgattgcaccggta
gatagagcagcggttcgagacgagcagtacgcatccaaagttggagcaggtgggactctc
tttcgtaaacgactcggaaatgcgccgtgggcacctttaaagattgcatccggttgtgat
cgtcgttgttcattttgcgccattccttatttccgaggctcttttgtttcaagacgccca
gttgaaattcttgaagaggctacatggctcgccagtaacggtgtttcagagttatttctt
gtcagcgaaaatacaacgtcatacggtaaagacttaggcgacctacgtttaatggaaacc
atacttccagatatcgcggcaatttctggtgttgagcgggttcggttgtcatacctgcaa
ccagcagagatgcgcccttccttattacaagccatggtggccaccgataaagttgctcca
tattttgatctctcttttcaacatacaagtccatcagtgttgcgagcaatgcgacgattt
ggcgatagtgaaaaattcctgcatctgatttcacaaatcagggcactcgatccgcaagca
ggtattcgctccaatttcattgtgggttttccaggtgaaacacaagaagattttgatgga
ctggcagagttcataacacacgcacagctagatgcagttggaatctttggctactccgat
gaggacaacacggaagcactgtctctcggagaaaaactagaggcagaagttatttcacag
cgggtggaaactctttcaacgttggcagatgaaatggtttcagagcgcgcgcagaagagg
gttggccagagcgttcgagtattgattgaagatgcagagttacaagaaggacgagccgca
catcaaggtccagaagtagatgggacaacgacttttgttggcacagattacaaagttgga
gagtatgttgatggcgttgttatagaaagcatcggagcagacctggtggccagagcgcaa
tga
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