Candidatus Planktophila limnetica: PHILAsVB114_02565
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Entry
PHILAsVB114_02565 CDS
T05067
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
plim
Candidatus Planktophila limnetica
Brite
KEGG Orthology (KO) [BR:
plim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plim03032
]
PHILAsVB114_02565
03036 Chromosome and associated proteins [BR:
plim03036
]
PHILAsVB114_02565
03400 DNA repair and recombination proteins [BR:
plim03400
]
PHILAsVB114_02565
DNA replication proteins [BR:
plim03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PHILAsVB114_02565
Chromosome and associated proteins [BR:
plim03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PHILAsVB114_02565
DNA repair and recombination proteins [BR:
plim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PHILAsVB114_02565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
Motif
Other DBs
NCBI-ProteinID:
ASY27545
UniProt:
A0A249LF89
LinkDB
All DBs
Position
477335..477769
Genome browser
AA seq
144 aa
AA seq
DB search
MNKAQFIAALAPHFNDSKKDAAHAVDVVFDTIVRAMSRGEDVMINDFGKFKKVDRKARMG
RNPFTGETIKIKASKKARFLPAKGLKEVIAGDRKLGPAPKIEPKAVAKAAPKKAAKKTAK
KAAPKKKAKKSAKRVVKKTAKKRR
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggcccaattcattgccgcgttggccccacacttcaacgacagcaagaaggac
gcagctcacgctgtagacgttgtttttgacacaatcgttcgtgcaatgtcacgtggcgaa
gatgtcatgatcaatgatttcggaaagtttaagaaagtagatcgcaaggctcgcatggga
cgtaacccgttcactggcgaaacaatcaagatcaaggcttcaaagaaggcacgcttccta
cctgcaaagggacttaaggaagttattgctggcgatcgtaaacttggaccagctccaaag
atcgagccaaaggcagttgctaaagctgctccaaagaaggctgctaagaagacagcaaag
aaagcagctccaaagaagaaggctaagaagagtgcaaagcgcgttgttaagaagaccgct
aagaagcgtcgttaa
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