Candidatus Planktophila limnetica: PHILAsVB114_02835
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Entry
PHILAsVB114_02835 CDS
T05067
Name
(GenBank) long-chain acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
plim
Candidatus Planktophila limnetica
Pathway
plim00061
Fatty acid biosynthesis
plim00071
Fatty acid degradation
plim01100
Metabolic pathways
plim01212
Fatty acid metabolism
plim02024
Quorum sensing
plim04146
Peroxisome
Module
plim_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
plim00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PHILAsVB114_02835
00071 Fatty acid degradation
PHILAsVB114_02835
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PHILAsVB114_02835
09145 Cellular community - prokaryotes
02024 Quorum sensing
PHILAsVB114_02835
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
plim01004
]
PHILAsVB114_02835
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plim04147
]
PHILAsVB114_02835
Enzymes [BR:
plim01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PHILAsVB114_02835
Lipid biosynthesis proteins [BR:
plim01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PHILAsVB114_02835
Exosome [BR:
plim04147
]
Exosomal proteins
Exosomal proteins of breast milk
PHILAsVB114_02835
Exosomal proteins of breast cancer cells
PHILAsVB114_02835
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ASY27598
UniProt:
A0A249LEQ4
LinkDB
All DBs
Position
complement(529749..531539)
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AA seq
596 aa
AA seq
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MNEISVPALVPIASAGNLTNLVSERAWFEPERVMLSRALGDGWQSVTAKEFESEVRATAK
GLVAAGINIGDRVAIMARTRYEWTILDFAIWYAGGCVVPIYDTSSAEQIDWILNDSGAVA
IIVETPALRDLVKTVQPSHTTRMWTMTENVLATLAYDGAAVSDEEIEKRRKALLPETLAT
LIYTSGTTGKPKGVQISHANFLAECGNVVQGANDLFLKPGGSTLLFLPVAHVFGRMVQIG
SVAAGLHLAHCSDPVGRLPIDLASFKPTFVLAVPRIFEKVYNGAEAKAEAAGKGKIFRKA
ADIAIEYSRGIESGKISPALKFKHGLFDKLVYSKIRTGLGGRVEAAISGGAPLGERLGHF
YRGAGITILEGYGLTETTAGATLNLTNEIRVGSVGRPIPGTTIKIAEDGEVLIKGPIVMQ
GYWKNDAANAEVFSGDRWFHSGDLGKLDDEGYLFIVGRKKELIVTAGGKNVAPAVLEDRL
RAHPLISQCMVVGDNQPFIATLVTIDQDALKTWVVANKKEGASLADLTTDPDLVAVIQTA
VDEANKAVSRAESIRKFRILPTDFTIAGGHLTAKLSLKRHVIGKEFAADIAALFAD
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagatctcagtcccggcccttgtgccgattgccagcgctggaaacctaacaaac
cttgtatcagaacgtgcgtggttcgaacctgaacgcgtcatgctctcacgtgcactcgga
gatggttggcagagtgttactgcaaaagagtttgaatctgaagtacgtgcaaccgcaaaa
ggtctcgttgctgcaggaataaacattggtgaccgagtcgcaatcatggctcgcactcgt
tatgaatggacgattttagattttgcaatttggtatgccggcggttgtgttgttcctatt
tatgacacatcatcggctgaacaaattgattggattctcaacgattcaggtgcggttgca
attatcgtagaaactcctgcgttgcgagatctcgttaaaactgttcaaccatcacacacc
acacgtatgtggacgatgactgaaaatgtcttggcaacacttgcctacgatggagcagcc
gtcagcgatgaagagatcgaaaagcgcagaaaagctttattgcccgaaacgttggcaaca
cttatctacacatcaggtacaacaggtaaacctaaaggtgtccaaatttcacacgcaaac
ttcttagccgagtgtggaaacgttgtacaaggagcaaatgatttgttcctcaagcctggt
ggatcaacacttttattcttaccggtagctcacgtctttggacgcatggttcaaattggt
tctgttgccgcaggtttacatctggcacattgcagcgatcctgttgggcgcttaccaatt
gatcttgcttcctttaagccgactttcgtgcttgcagttcctcgcatctttgaaaaggta
tacaacggcgctgaagcaaaagcagaagctgctggcaagggaaaaatatttagaaaagct
gcagacattgcaattgaatacagccgaggaatcgagagtggcaaaatttcacctgcgctt
aagtttaagcatggactctttgacaaacttgtgtactcaaagattcgtaccggtttaggt
gggcgtgtagaggctgctatttcaggaggcgcgccactaggtgagcgactcggtcacttc
taccgtggcgctggcatcacaattcttgaaggttacggactgactgaaacaacagccgga
gcaacacttaacctaacaaatgaaattcgagttggttcagttggtcgtccaattcctggc
acaacaataaaaattgctgaagatggagaagttctcatcaagggaccaatcgttatgcag
ggttactggaaaaatgatgcggcaaatgccgaagtattctccggcgatcgatggtttcac
tctggagatctcggcaaactcgatgatgaaggatatttatttattgtcggacgcaagaaa
gaacttattgttacagccggtggaaaaaacgttgcaccagctgttcttgaagatagattg
cgcgctcacccactgattagccagtgcatggtcgttggcgataatcaaccatttattgca
accttggtaactatcgatcaagatgcattaaagacatgggtcgtagctaataaaaaagag
ggtgcatcccttgctgatctgacaacagatccagaccttgttgctgttattcaaacagca
gtagatgaagcaaataaggcagtcagccgtgcggaatcaattcgcaagtttagaattctg
ccaactgatttcaccattgcaggcggtcatctcaccgcaaaactttcattaaagcgccac
gtgattggaaaagaattcgcagcagatatcgctgccctctttgcagattag
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