Candidatus Planktophila limnetica: PHILAsVB114_03175
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Entry
PHILAsVB114_03175 CDS
T05067
Name
(GenBank) holliday junction DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
plim
Candidatus Planktophila limnetica
Pathway
plim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PHILAsVB114_03175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plim03400
]
PHILAsVB114_03175
DNA repair and recombination proteins [BR:
plim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PHILAsVB114_03175
RecFOR pathway proteins
PHILAsVB114_03175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
HHH_3
5_3_exonuc
IMS_HHH
DUF3701
Motif
Other DBs
NCBI-ProteinID:
ASY27657
UniProt:
A0A249LF77
LinkDB
All DBs
Position
587341..587940
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AA seq
199 aa
AA seq
DB search
MIATLSGTVRSLTADRAIIEVGGVGMNVLINAHTSNSLTVGAHANLFTSLVVREDSLTLF
GFSDEASRVLFELVQTVSGIGPKVALSILGALTPSELAQAINTENISAIEKVPGIGKKGA
QRLILELKSKISDFGQGSYTRSHQPVWREQLTSALISLGFSAKDSDDAISLVLSDISQEE
IAQMELGELLKLALQNGKK
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgattgcaacacttagtggcacagtcagatcacttactgccgatagagcaattattgaa
gttgggggagtaggcatgaatgttttaatcaatgcacacaccagcaattcattaacagtt
ggagcacatgcaaatttattcacatcccttgttgtgcgagaagattcgctgactctcttt
ggttttagtgatgaagcatctcgagttctctttgaattggttcaaacggtttcaggtatt
ggtcccaaagtcgcgctctccattttgggagcactgacaccgtcggagttagcacaggcg
ataaataccgaaaatatttctgccattgagaaagtccccggaattggcaaaaaaggtgcc
cagcgtttaatcctcgagctcaaatcaaagataagtgatttcggacaaggttcatatacg
agatcacatcaacccgtgtggcgcgaacaattaacgagtgcgcttatctctttaggattt
tcggccaaagattccgatgatgcaattagcctcgttctatctgacatttcgcaagaagaa
attgcacaaatggagttaggcgaattgttaaaacttgcattacaaaatggtaaaaaatga
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