Candidatus Planktophila limnetica: PHILAsVB114_03600
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Entry
PHILAsVB114_03600 CDS
T05067
Name
(GenBank) 23S rRNA pseudouridine2605 synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
plim
Candidatus Planktophila limnetica
Brite
KEGG Orthology (KO) [BR:
plim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plim03009
]
PHILAsVB114_03600
Enzymes [BR:
plim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
PHILAsVB114_03600
Ribosome biogenesis [BR:
plim03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PHILAsVB114_03600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ASY27734
UniProt:
A0A249LFL1
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All DBs
Position
complement(668259..668972)
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AA seq
237 aa
AA seq
DB search
MSEKRLNKIIADAGITSRRGADDLIASGRVSVDGLVTRELGAKFDPAKSEVMVDGETITQ
SLTKTYLALHKPKGVLSTMFDPEGRPCLSDFIDLRTERLFHVGRLDKDSEGLILLTNDGE
LTFRATHPSYGLEKTYIIEYEGKLPVGVEKTLLKGVELEDGIGRVLTFKELSPTWVEVSI
HEGRYHIIRRLMAAVGIDVLRLIRTKFGPISLGETAEGRWRDLNSGELLNIQKALNI
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaacgcttgaataaaattatcgctgatgcgggtatcacgagccgcagggga
gccgatgatttaatcgcttccggtcgtgtcagtgttgatggattggtcaccagagaactc
ggtgccaaatttgatccagcaaaatctgaagtcatggttgatggtgagacaattacgcaa
tctttgaccaaaacttacctagcacttcataagcctaaaggtgtcttgtccaccatgttt
gatccagaaggccgaccttgtttaagtgactttattgacctacgaacagaacgacttttt
catgtagggcgtctggataaggattctgaaggtctaattcttctgactaatgatggcgaa
ttaacctttcgagcgacccatccttcttatggtttggaaaaaacttacataattgaatac
gaaggcaagttgccggtaggggtggaaaaaactctccttaaaggtgtcgagctcgaagac
ggaataggacgagttctgactttcaaagagctctcacccacatgggttgaagtgagtatc
catgaaggtcgttaccacatcatccgccgattgatggctgccgtcgggatcgacgttctt
cgtttgatacgtacgaagttcggacctatctcgctgggagaaacagctgaaggaaggtgg
agagatttgaactccggagaattgttaaatatacaaaaggctttaaacatttaa
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