Candidatus Planktophila limnetica: PHILAsVB114_03640
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Entry
PHILAsVB114_03640 CDS
T05067
Name
(GenBank) DNA repair protein RecN (Recombination protein N)
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
plim
Candidatus Planktophila limnetica
Brite
KEGG Orthology (KO) [BR:
plim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plim03400
]
PHILAsVB114_03640
DNA repair and recombination proteins [BR:
plim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PHILAsVB114_03640
TLS (translesion DNA synthesis) factors
Other SOS response factors
PHILAsVB114_03640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
AAA_22
ABC_tran_CTD
Baculo_PEP_C
Prefoldin_2
DUF4335
NTPase_P4
CCDC-167
Med9
AAA_27
AAA_30
AAA_16
RH1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ASY27741
UniProt:
A0A249LF41
LinkDB
All DBs
Position
complement(675582..677309)
Genome browser
AA seq
575 aa
AA seq
DB search
MSERTFLEEIHIKNIGVITGAALEFNKGLTVLTGETGAGKTMVLTALNLVLGGKSESTLV
RSGEDRLSASALFSIPKTRVSNFEDLGLEVEDGTLAISRNVTKDGKSKAVASGVAVSAST
LSEASAHLIEIHGQSSGLSITKGSRQRELLDRFAGETLSKNLLVYQENLNEYTSIKSRIN
ELKKNAATREEALASLELFSKTISKLSPKANEFKSIDDEVSKLSSVEELRVAITFALAAL
ENEDSGAINSLGQAKKSLDNVKAKDSQVEKFSDEFNEAFFILADLMPNLTSYLESLEADP
QRLDQLQERKSELSAFVKKWGDLPDLDQSLAALIQRGKTISAQLEDLSGGEERIDALEKE
LNQIKKNLLTEAKALSKIRNQVALKLADQVSTEMHSLSMPQTNLRIEVASPDYEAALKES
DFTAFGCDSVSMFLQTHRDGPLVSLAKGASGGEMSRVMLALEVVIAASNPVGTYIFDEVD
AGVGGAAAIEVGRRLHALSKNAQVIVVTHLPQVAAWGDSHYVVEKSIDGTVVSSGVNRVE
GDDRVSEIARMLAGLQESSSAKEHASELLEMRLRG
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaacgaacttttttagaagagatacatataaaaaatattggtgttataactggc
gcagcacttgaattcaacaaaggtttgaccgtacttaccggtgaaactggcgctggtaaa
acaatggtccttacagcgctcaatcttgttttgggcggcaagtccgaaagtactctggtc
agaagtggtgaagacagattatcggctagcgctctttttagtattcctaaaacaagagtg
agcaattttgaagatctgggtttggaagttgaagatggcaccctagcaatttctaggaat
gtaactaaagatggaaagagcaaagctgtggcaagcggtgttgctgttagcgctagcact
ctttcagaagctagtgcgcacctcattgaaatacatggacaaagttcgggtttatccata
actaaaggttctcgtcaacgagagttattagatagatttgctggtgaaactttaagtaaa
aacttgcttgtttaccaagagaatttgaatgaatacacaagtattaaatcccgcattaat
gaactaaagaagaacgcagcgaccagggaagaagccttggcatcacttgagttatttagt
aaaaccatctccaagctttccccgaaagccaacgagttcaaatctatagatgatgaagta
tctaaactttcatccgttgaggagttgagagtagcaatcacttttgctctagcagcgcta
gaaaatgaggactctggcgctattaattctttaggacaagccaagaaatcattagataac
gttaaagctaaggattcccaggttgagaagttctctgatgagttcaacgaagcattcttt
atcctcgcagatttaatgccaaatctaacttcgtacttagagtcactagaagcagatccg
cagaggttagatcagttacaagagcgcaaatctgaattatccgcctttgtaaaaaaatgg
ggcgatttacctgacttagatcaatctttggcagccctcattcaaagaggcaagacaata
agtgctcaactagaggatttaagcggaggcgaagagcgcatcgacgctttagaaaaagag
ttaaatcagattaagaaaaatcttttaactgaggccaaggccctatcaaaaattcgcaat
caagtagctttgaaattagccgatcaggtttcaactgaaatgcattctttatctatgcct
caaacaaatcttcgcatcgaagtggcatcaccagattatgaagcagcgcttaaagagagt
gatttcactgctttcgggtgtgattcggtaagtatgtttttgcaaacgcatcgtgacgga
cctcttgtctctctcgctaagggcgcatcaggtggtgaaatgtcgcgtgtaatgcttgct
cttgaagttgtaattgctgcttcaaatccagtgggcacatatatatttgacgaagttgat
gcaggtgtcgggggagcagctgcaattgaagtaggtcgcagattgcatgcactttcaaaa
aatgcacaagtcattgttgttacacacttgcctcaagtagctgcttggggtgattcgcat
tatgtagttgagaaaagtattgatggaacagttgtatcaagtggtgttaatcgcgttgaa
ggcgatgatcgcgtgagtgagattgcgcgaatgttggccggtcttcaggaatcctctagc
gctaaggaacacgcgagcgaattgctcgaaatgcgattaagaggataa
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