| Entry |
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| Name |
(GenBank) DNA polymerase III subunit alpha
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| KO |
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| Organism |
plim Candidatus Planktophila limnetica
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:plim00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PHILAsVB114_04040
03430 Mismatch repair
PHILAsVB114_04040
03440 Homologous recombination
PHILAsVB114_04040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:plim03032]
PHILAsVB114_04040
03400 DNA repair and recombination proteins [BR:plim03400]
PHILAsVB114_04040
Enzymes [BR:plim01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PHILAsVB114_04040
DNA replication proteins [BR:plim03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PHILAsVB114_04040
DNA repair and recombination proteins [BR:plim03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PHILAsVB114_04040
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(761368..764862)
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| AA seq |
1164 aa
MSSFAHLHVHTEYSMLDGAARVADLVAEVARQEMPAIAMTDHGNVFGAFDFYKQAKKVGV
KPIIGIEAYVAPESRFEKKRVKWADGGQDDVSGGGAYTHMTILAENNEGLSNLFRLSSLA
SLEGYYYKPRMDRELLTKYAKGLIATTGCPGGEIQTRLRMGAFKEAMAAASDYRDIFGAE
NFFLEIMDHGIDIESRVKADLLKLGKELGLPLLATNDLHYTFNEDARSHEALLCVQSGST
LADPKRFKFDNDEFYLKTPAQMRELFKEIPESCDNTLLIAERCNVTLREGENLLPRFEVP
AGETEDSWLIKEAERGLINRMGNRLTDEHHARLKYELDVMIKMGFPGYFLVVADLVAHAK
QVAIRVGPGRGSAAGSLVAYALGITGLDPLEHGLLFERFLNPERISMPDIDLDFDERRRS
EMIRYATTKYGEDRVAQIITYGTIKSKQAIKDSTRVLGYPYAIGEKLTKALPPSVMGKDI
SLAGVFDSTNDRYSEAGEFRTLYESDPDSKTVIDTAMGLEGLKRQWGVHAAGVILSREPL
LDVIPIHRREADGSIITQFDMGACEATGLLKMDFLGLRNLSVLDDALLNIKANKGVDVVL
EDLTLDDKKTFELLSRGDTLGVFQLDGGPMRALLRSMSPDSFQDISAVIALYRPGPMGEN
AHNNYADRKNKRKPVEPIHAELSDSLNEILGDTYGLIVYQEQVMAIAQKVAGFSLGRADL
LRKAMSKKNKEILDKEYIPFEAGMKTNGFGNAAIKRLWDVLIPFSDYAFNRAHSAGYGVV
SYWTAYLKANYPTEYMAALLTSVRDDKDKSALYLSECRRMGIQVLPPDVNESDAEYTPRG
TDIRFGLAAIRNVGEGVVASIKSGRDGKGRYQSFGDFLAKVDAQVCNKKTIESLIKAGAF
DSLSHTRKGLMAVYLEAIDSVIETKRAEAIGQFDLFGGESATSVSNVALDIPTGEWEKAM
LLSYEREMLGLYVSDHPLLGVEHVLRSGTDMSISELLDDGGHHDQIVTIGGLITSVTRKV
TRQGASWAVVTIEDLEGSIEALFFSNTYNQYALTLTEDRIVLIRGRVDKREDQVRFTALE
MKNADVSAAPTGPLVITLPINQCTPPVVDRMKEILRSHPGKREVHLHLDENGMRTVMKLD
TLITSSPSLSADLKSILGPNCLQG |
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| NT seq |
3495 nt +upstreamnt +downstreamnt
atgtcatcttttgcccaccttcatgttcataccgagtattcaatgctcgatggtgccgcg
cgcgttgcagatcttgtagcagaagtcgcccgccaggagatgccggcgattgcaatgaca
gatcatggaaatgtatttggtgcttttgatttctataagcaagcaaaaaaagttggcgtt
aaaccaatcatcggaatcgaagcttacgttgcacctgaatctcgttttgaaaagaagcga
gtgaagtgggccgatggcggccaagatgatgtctctggtggtggtgcttatacgcacatg
acaattttggccgaaaacaatgaaggactttcaaatcttttcagactttcatcccttgca
tccctggaaggctattactacaagccgcggatggatcgtgagttactaacaaaatatgca
aaaggattgatcgcaacaactggctgtcctggtggagaaatacagactcgccttcgaatg
ggtgcatttaaagaagctatggctgcagcttcagattatcgagacatcttcggcgccgaa
aatttcttccttgaaattatggatcacggtatcgatatcgaatcacgcgttaaagctgat
ttacttaagttgggcaaagagcttggattgccactgctggccacaaatgatttgcactac
acattcaatgaagatgcacgttcacatgaggcactgctctgtgtgcaatctggatcaact
cttgcagatcccaagagatttaaattcgataacgatgagttttatcttaaaactccggca
cagatgcgcgaactattcaaagaaattcctgaaagttgcgataacactttgttgattgcc
gaacgatgcaatgtgacgctgcgcgaaggtgagaatttacttccacgctttgaagttccc
gcaggtgaaacagaggattcatggctgataaaagaggcagaacgtggattaatcaatcgc
atgggcaatcgattaactgatgaacaccatgcacgtttgaaatatgagttagatgtcatg
atcaaaatgggatttcctggttacttcttagtggttgcagatttagttgcacatgcaaag
caggtggcaatccgagttggtcctggtcgcggttctgccgctggttcacttgttgcctat
gcactcggaattacaggtcttgatccacttgagcacggtttactcttcgagcgattttta
aatccagaacgtatctctatgccagatattgatctggattttgatgaacgcagacgcagc
gaaatgattcgttatgcaacaacaaaatatggcgaagatcgcgttgctcaaatcattacc
tacggcaccattaaatctaagcaggcgattaaagactccactcgtgtacttggctatcca
tatgccatcggtgaaaagctcactaaagcgctgccaccatctgttatgggtaaagatatt
tctttggccggagtatttgattcaactaatgatcgatactcagaagccggggagtttaga
actctctatgaaagtgatcctgattccaaaacagttatagatactgcaatgggacttgaa
gggctcaagcgccagtggggcgtgcacgcagccggagttattctctctcgcgaaccacta
ttagatgtcattcctattcatcgccgcgaagcagatggttccatcattacccaatttgat
atgggtgcatgcgaagcaactggattgctcaagatggattttcttggccttcgaaatctt
tccgttctagatgatgctctgttaaacatcaaggcaaataaaggcgttgatgttgttcta
gaagatctcacgttagatgacaaaaaaacattcgaactcttatcccgcggtgacaccctg
ggtgtgttccagctagatggtgggccgatgcgcgcacttttgcgcagcatgtcacctgat
tctttccaagatatctctgcagttattgctctctatcgcccaggtccaatgggagaaaat
gcgcacaataactatgcggatagaaagaacaaacgcaaaccggtcgagccaattcacgct
gagttatcagattccctcaatgaaattttgggcgatacgtatggattaattgtttaccaa
gaacaggttatggccattgcgcaaaaagttgcgggattctcacttggacgcgcagatctc
ttgcgtaaagcaatgagtaagaagaacaaggaaattcttgataaggaatacattccattt
gaagctggtatgaagacaaatggttttggtaatgccgctatcaagcgcttgtgggatgtt
ttgattccgttctcagactatgcgttcaaccgtgcccatagtgcgggttacggcgtagtt
tcatattggaccgcatacctcaaagccaattatccaactgaatacatggcagcacttctc
acatctgttcgagatgataaagataaatctgctctgtatttaagtgagtgccgtcgtatg
ggtattcaagtattgccaccagatgttaatgaatctgacgccgaatacaccccacgagga
acagatattcgtttcggtctagccgcaattagaaacgttggcgaaggcgtggttgcatct
attaagagtggacgagatggcaaagggcgctaccaatccttcggagatttcttagccaaa
gtagatgcacaggtgtgtaataagaaaacaatcgaatcattgattaaggccggcgcattt
gattccctgtctcacacgcgtaaaggattaatggctgtttatttggaggcaattgattca
gtcattgaaacaaaacgcgctgaagcaatcggacaatttgatttgttcggaggcgagtca
gcaacgtcggtatcaaatgttgcgctagatattccaacaggtgagtgggaaaaagcaatg
cttttatcctatgaacgagaaatgttgggactctatgtttcagatcatccattactcggt
gttgaacatgtgttgcgttctggaacagatatgtcgattagcgaattactagatgatggt
ggccatcatgaccagatcgtcaccattggcggactgattacatctgtcacaagaaaagta
accagacaaggtgcgtcgtgggcagttgtcaccattgaagatcttgaaggatctattgaa
gctctcttcttttccaatacctacaatcaatacgccttaactctgactgaagatcgaatt
gttctcattcgtggtcgagttgataagcgtgaagatcaagtcagatttacagcccttgaa
atgaaaaatgcggacgtcagcgccgcaccgacaggtccgcttgtaatcaccctgccaatt
aatcaatgcacaccaccagttgttgatcgcatgaaagagattcttcgttcacaccctgga
aaacgcgaagttcatttacatctagatgagaatggaatgcgcaccgtgatgaaattggac
accttgattacatcatcgccatcgctgagcgctgatctcaaatcaatcctcgggcctaac
tgccttcagggctag |
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