Candidatus Planktophila limnetica: PHILAsVB114_04350
Help
Entry
PHILAsVB114_04350 CDS
T05067
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
plim
Candidatus Planktophila limnetica
Brite
KEGG Orthology (KO) [BR:
plim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plim03032
]
PHILAsVB114_04350
03400 DNA repair and recombination proteins [BR:
plim03400
]
PHILAsVB114_04350
Enzymes [BR:
plim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PHILAsVB114_04350
DNA replication proteins [BR:
plim03032
]
Prokaryotic type
DNA Topoisomerases
PHILAsVB114_04350
DNA repair and recombination proteins [BR:
plim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PHILAsVB114_04350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
Motif
Other DBs
NCBI-ProteinID:
ASY27869
UniProt:
A0A249LG14
LinkDB
All DBs
Position
825910..827427
Genome browser
AA seq
505 aa
AA seq
DB search
MATKTPPKGKKPAGPKPGEFPGKIVDIDVSSEMSESFLEYAYSVIYSRALPDARDGLKPV
HRRILHQMAEMGLRPDKGHVKSARVVGEVMGKLHPHGDGAIYDALVRMAQSFSMRLPLID
GHGNFGSLDAGPAAMRYTEARLAQAALTMVAETDEDTVDFGANYDGQIFEPQVLPAAYPN
LLVNGGSGIAVGMATNMAPHNLGEVIAATKHLIENPTATVKALMKFIPGPDFPTGGELVG
LEGVREAYSTGKGSFKVRATVEISKVTTRKMGITIKELPFTIGPEKVVERIADLAKAKKI
QGISDIIDLTDGQTGTNVVIELKNGFEPEAVLEQLFKLTPMEDAFAINAVALVKGRPQTL
GLKELLQVFIDHRIEVVRRRSEFRKAKASGRLTLVDGLLKAIIDIDKVIKIIRASDDASI
AKDALIKGFKLNDEQVTYILDMPLRRLTKMSKIELETEQKELKSTIAALNTLLKSEDAIK
KQVSTELDAVAKAFATPRRTRIGAA
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggctacgaagactccgcccaagggcaaaaaacctgctggccctaaaccaggtgaattt
cccggcaagattgttgatatcgatgtttcatctgaaatgtcagaatcatttctggagtat
gcctactctgtaatttattctcgcgcattacctgatgcacgcgatggtttaaaacctgtt
caccgtcgcatcttgcaccagatggcagaaatgggattgcgtcccgataaaggtcacgtg
aagagtgcacgtgttgttggtgaagtgatgggtaaattacaccctcacggtgatggcgca
atttatgacgcactcgttcgtatggctcaatctttttctatgcgtttgccactaatcgat
ggtcacggaaacttcggttcattagatgctggtccggcagcaatgcgttatacagaagcg
cgcttggcacaagcagcgctgacaatggttgccgaaacagatgaagacacagttgatttt
ggtgctaactacgacggacagatctttgaaccacaagtattgcctgcggcttatccaaac
ctgctcgtcaatggcggttctggaattgcagtgggtatggcgacaaatatggcgccgcat
aacttaggtgaagtaattgcagcaactaagcacctgattgaaaacccaactgcaacagtt
aaagcgctcatgaaatttattcctggtccagattttccaacaggtggagaattagttgga
ctggaaggcgttcgcgaagcgtattcaacgggcaaaggttcctttaaggtccgtgcaact
gttgagatttctaaagtcacaacccgcaagatgggcatcactatcaaagagttgccattt
accatcgggccagaaaaagttgttgaacgtattgcagaccttgctaaggctaagaaaatt
caaggcatctcagacatcattgatttaactgatggacaaacaggcacaaacgttgtcatc
gaactaaaaaatggatttgaaccagaggcagttcttgagcaactatttaagttaactccc
atggaagatgcctttgctattaacgcagttgcactggtcaagggtcgcccgcagacactt
ggcctgaaagaactactgcaggtctttatcgatcaccgcatcgaagttgttcgtcgccgc
tctgagtttagaaaagccaaagcaagtgggcgtttaactctggtcgatggtctacttaaa
gcgattatcgatatcgacaaggtcatcaaaattatccgtgcatcagatgatgcaagcatt
gcaaaggatgctttgatcaagggctttaaactcaatgacgaacaagtcacatacattctt
gatatgccacttcgtcgtctgaccaagatgagcaaaatcgaacttgagaccgaacaaaaa
gaactcaaatccacaattgctgcccttaatacacttttgaaatcagaggatgcaattaag
aagcaggtgtcgacagagttagatgctgtggccaaagcatttgctacccctcgtcgcaca
cgcatcggcgctgcctga
DBGET
integrated database retrieval system
