Candidatus Planktophila limnetica: PHILAsVB114_04565
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Entry
PHILAsVB114_04565 CDS
T05067
Name
(GenBank) putative spermidine/putrescine transport system ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
plim
Candidatus Planktophila limnetica
Pathway
plim02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
plim00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PHILAsVB114_04565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plim02000
]
PHILAsVB114_04565
Transporters [BR:
plim02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PHILAsVB114_04565
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_22
AAA
AAA_30
AAA_16
nSTAND1
nSTAND_NTPase5
AAA_23
AAA_29
Mg_chelatase
RsgA_GTPase
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ASY27906
UniProt:
A0A249LG60
LinkDB
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Position
complement(870853..871881)
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AA seq
342 aa
AA seq
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MSAGFVSLRGVNKFFDDVHAVANLDLDVHAGEFFSMLGPSGSGKTTVLRLIAGFESASSG
AISIESQDVTALAPFDRPVNTVFQDYALFPHMSIQENVEYGLRTRKVPKAERAKQALEAI
DSVKLSHLSKRLPHQLSGGQRQRIALARALVLRPKVLLLDEPLGALDKQLREEMQVELKR
IQREAGITFIFVTHDQEEAMRMSDRIAVFNAGSIEQIGTPQEVYERPQTKFVASFLGVSN
IFSGQDAQEIFGSQVMVNIRPERIKLVPPDTKPQANERGVVGTIIEASYIGATTIYLIQT
QSGQRVIATRLNEELPDQINRFVTGDRVGAVWKSDHSAVIPT
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgcaggctttgtctcacttcgtggcgtcaataagttctttgatgatgttcacgca
gttgctaatttagatttagatgttcacgccggtgaattcttctcaatgcttggtccttct
ggttcaggtaagacaactgttctcagattaattgcaggttttgaaagtgcgagctcaggt
gcaatttcaattgagtctcaagatgtgacagcgctggcgccatttgatcgcccagtaaat
acagttttccaagattacgctctttttccacacatgagcattcaagaaaatgtggagtac
ggacttcgcacaagaaaagtgccaaaggcagaacgcgcaaagcaagcacttgaagcaatt
gattcagtaaagctctctcacctttcaaagcgtttgccacaccaactatcaggtggtcag
cgccaaagaattgctctggcaagagcgctcgttcttagaccaaaggtattgcttctagat
gaaccacttggcgcactagataagcagttgcgcgaagagatgcaggttgagttaaagcgc
atccaacgcgaagccggaattacttttatctttgtgactcacgatcaagaagaagcaatg
cgcatgagtgatcgcattgcagtctttaacgcaggctcaatcgagcagatcggcactcca
caagaggtctatgagagaccacagaccaaatttgttgctagcttcttaggagtttcaaat
attttttcaggtcaggatgcgcaggagatttttggtagccaggtgatggtaaatatcagg
cctgagcgaattaaattagtacccccagataccaagccacaggctaatgagcgcggcgta
gtcggaacaattattgaggcctcatatatcggggcaaccacaatctatttaatccaaaca
caatctgggcagagagtaattgccaccagattaaatgaagaattgccagatcaaatcaac
cgatttgttactggcgatcgggtcggtgccgtttggaaaagcgaccactcggcagtcata
cccacctaa
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