Candidatus Planktophila limnetica: PHILAsVB114_04845
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Entry
PHILAsVB114_04845 CDS
T05067
Name
(GenBank) glycine betaine/proline transport system permease protein
KO
K02001
glycine betaine/proline transport system permease protein
Organism
plim
Candidatus Planktophila limnetica
Pathway
plim02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
plim00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PHILAsVB114_04845
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plim02000
]
PHILAsVB114_04845
Transporters [BR:
plim02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
PHILAsVB114_04845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ASY27952
UniProt:
A0A249LFT4
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All DBs
Position
complement(924323..926251)
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AA seq
642 aa
AA seq
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MKIRKSYLLLASVTVWILLGRLLNGTHTLQIATYENTAFTKFVGEKALDLRGNRTESPAF
IYFFNPIRGAIDGFVQMIRNLIAVPAPNSVIPIIGWLGVVAIVAFAVYATSQWRTALLSV
SLLVACGALGMWQFTMDSIAMTLAAVLLSLAIGIPLGIWAGLSDRVLKIFTPFLDLAQIL
PTLVYMAPIALVFMIGAASATIATMIYSIPIAIRITSHAIRNLNQSPVEAAESMGSTQMQ
KLSKVQVPMAKQMIVLGINQTVMAAVSFVVIAALIGAPGLGKPVIEALIIRNVGQGFVAG
FAVVFLAILLDRSTSAAAKRQDSFVPATEKQIKTKRITLIVAAILAVVSVFMSRTMLWAA
VWPKEFTIAPQVAKVTNSATAWILENLTIFTVGFKDLISYSILNPLETQLAASPWYVTVG
MIVALAIIIGGTRTAILAFFLAMAIVVSGLWYEAMLTLTQTIVGCMLTMIIGLALGIWTG
RSDRAEKVLRPFLDAGQTLPAFVYLVPMLGLFGPTRFTAIATGIVYSIPVVVKIVSEGIR
AVPHALIEAATAAGSTARQIITKVQLPAARKTILLATNQGLIYVLAVVVIGGFVGAGGLG
YLVIAGNSKPELQGKGLIAGVAILLLGVIFDRIMQAGARRSS
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcgtaagtcctatctacttcttgcctcagtaacagtgtggattttgctgggc
cgattactcaatggcacacacacattgcagattgccacctatgagaacactgcattcacc
aaatttgttggcgaaaaagccttggatcttcggggaaatagaacagagagccctgctttc
atttattttttcaatccgattcgtggggcaattgatggctttgtccagatgatcagaaat
ctcattgcagttcctgcaccaaactcagttattccaatcattggctggttaggtgtagtt
gccattgttgcctttgcagtttatgcaacgagccaatggcgaaccgcgctcttatcagtt
tcacttctagttgcctgcggcgcactgggaatgtggcaattcactatggactccattgca
atgactttggctgcagtacttctttcattagcaataggaatcccgcttggaatctgggca
ggtttatcagatcgggtcttaaaaatatttacgccctttctcgatttagctcagattttg
ccgaccctagtttatatggcaccaatcgcactggtctttatgattggtgcggcttcagca
acgattgcaacgatgatctattccattccaatcgcaattcgtattacaagccatgcgatt
agaaatttgaaccaatctcccgttgaagctgctgagtcaatgggatcgacgcagatgcag
aaattatccaaagttcaagttcccatggcaaagcagatgattgtgcttggtattaatcaa
acagtgatggctgcggtttcattcgtagtgatcgccgctctcattggtgcacctggactt
ggtaaaccagttattgaggccttgattatccgaaacgttgggcagggctttgtggccggc
tttgccgtagttttcttagcgattttgcttgatcgcagcactagcgctgcagctaagcgc
caagattcatttgttccagcgactgaaaagcagattaagacaaagcgcatcacattaata
gttgcggcaattcttgcagttgtatctgtctttatgtctcgcacaatgttgtgggcagcg
gtttggccaaaagaattcaccattgcaccgcaagtggcaaaggttactaatagtgcaacg
gcttggattttagaaaacctcacaatctttaccgttggctttaaagatttaatctcctat
tccattctcaatccattagaaacacaacttgctgcatccccttggtatgtaacagtggga
atgattgtggcactcgccatcattattggcggaacaagaactgcaatcttggctttcttt
ctagcaatggcgattgttgtatccggtctttggtatgaagcaatgttgacgcttactcag
acaattgttgggtgcatgctcacaatgattatcggtctggcacttggtatttggacaggt
cgcagcgatcgagcagagaaggtattgcgtccattccttgatgccggacaaacccttccc
gcatttgtgtatttagtgccgatgttaggtttatttggtcctactcgctttactgccatt
gcaactggcatcgtctattccattccagttgttgtaaagattgtgagcgaaggtatccgc
gcagttccacatgcactcattgaagcggcaaccgctgcaggctctacagcgcgccagatt
attaccaaggtgcaattgcctgctgcaaggaaaactattttgcttgcaaccaatcaaggt
ctgatctatgtcttggctgtagttgtcattggtggcttcgttggtgcgggtggtctgggt
tacttggtaatcgctggtaactccaagccagagcttcagggcaagggcctgattgcaggt
gttgccatcttgcttctaggcgttattttcgaccggattatgcaagccggcgcccgtcgc
tcctcataa
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