Candidatus Planktophila limnetica: PHILAsVB114_06460
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Entry
PHILAsVB114_06460 CDS
T05067
Name
(GenBank) DNA repair protein RadA/Sms
KO
K04485
DNA repair protein RadA/Sms
Organism
plim
Candidatus Planktophila limnetica
Brite
KEGG Orthology (KO) [BR:
plim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plim03400
]
PHILAsVB114_06460
DNA repair and recombination proteins [BR:
plim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PHILAsVB114_06460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DUF7125
AAA
DnaB_C
AAA_22
Lon_C
AAA_16
AAA_30
NTPase_1
nSTAND3
nSTAND_NTPase5
ABC_tran
AAA_14
AAA_5
RecA_N
AAA_24
MCM
NACHT
RsgA_GTPase
Rad51
TniB
AAA_29
DUF815
MMR_HSR1
CbiA
Fn3_nematode
AAA_18
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
ASY28239
UniProt:
A0A249LH38
LinkDB
All DBs
Position
1236191..1237558
Genome browser
AA seq
455 aa
AA seq
DB search
MAKVEKDPFRCTECGWSANKWVGRCGECQAWGTVEEINAPKRLSLVPGAVTHKATPIGDV
DLSAASAKPTGVSELDRVLGGGLVPGAAILLAGEPGVGKSTLLLSVAAQTAKVGIRALYI
SGEESASQVRLRAERINAIDSELFLASETDLSAVISHIDIVKPQLLIIDSIQTIGSAAAD
GAPGGVTQVREVAGALIRICKDRDITLLLVGHVTKDGSIAGPRMLEHIVDVVLQFEGERH
SRLRLIRAIKNRFGASDEVGCFDLSDSGIESVLDPTGLFTSRHSEPVPGTCVTVTLEGRR
PLLAEIQALVSAGRENDFGNARRVTSGLDSARTSMTLAVLELRAHVKVGGRDVYAATVGG
MKMSEPAADLALALSVASAAKGLALPADLVAIGEVGLAGEIRKVSGVERRLAEAFRLGFK
RALVPAGSDVKIAGMEIVEVSRLDQALTRVKINGE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggttgagaaggatccatttcgctgcaccgaatgtgggtggagtgcgaacaag
tgggttggccgttgcggtgaatgtcaggcatggggcactgtcgaagaaataaatgcacca
aagcgtttatcacttgttcctggcgcagtaacacataaagcaacaccaatcggcgatgta
gatctatcggccgcaagtgctaaaccaacaggagtcagcgaattagatcgcgttctcggt
ggcggactcgttccaggtgctgcaattttgttagccggtgaacccggtgttggtaaatca
actcttcttctctctgttgccgcgcaaactgcaaaagttggaatccgcgccctctatata
agcggtgaagagtcagcatctcaagttcgcttgcgcgcagaacgcattaacgcaattgat
tccgaattatttttagcctcagaaacagatctcagcgccgttatctctcatatcgacatc
gttaaaccgcagctgctaattatcgacagtatccaaactattggttcagctgcagcagat
ggcgcacctggtggtgttacacaggttcgcgaagttgctggtgcacttattcgtatctgc
aaagatcgcgacatcactctgcttctagttggtcacgtgacaaaagatggctcaattgca
ggtcctcgcatgcttgaacatatcgtcgatgttgtcctgcaattcgaaggcgagcgtcac
tcacgccttcgcttaattcgtgcgattaaaaatagatttggcgcaagcgatgaagttggt
tgctttgacctcagcgatagtggcatcgaaagtgttttggatccaacgggcctatttact
tcacgccatagcgagcctgtgcctggcacatgcgtaacagtcacactcgaaggacgcaga
ccgctacttgcagagattcaagcactagtaagtgcggggcgtgaaaatgatttcggtaat
gcacgccgcgtcacaagtggtttggattcagcccgcacatcaatgactctggctgttctt
gaactacgtgcacatgtaaaagttggtgggcgcgatgtctatgcagcaactgttggcggc
atgaagatgtccgaaccggctgcagaccttgcactggctctatctgtggcatctgctgca
aagggtttagctcttccagcagaccttgttgcaattggtgaagtcggtttagctggtgaa
ataagaaaagtaagcggtgtagaacgcagacttgctgaagcatttcgtcttggattcaaa
cgcgcacttgttcctgcaggctctgatgtaaagatcgccggaatggaaatcgtagaagtt
tctcgacttgatcaagctctcactagggtaaaaattaacggcgaatga
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