Candidatus Planktophila limnetica: PHILAsVB114_06465
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Entry
PHILAsVB114_06465 CDS
T05067
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
plim
Candidatus Planktophila limnetica
Pathway
plim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PHILAsVB114_06465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plim03400
]
PHILAsVB114_06465
Enzymes [BR:
plim01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
PHILAsVB114_06465
DNA repair and recombination proteins [BR:
plim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PHILAsVB114_06465
Prokaryotic type
PHILAsVB114_06465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
HHH
Motif
Other DBs
NCBI-ProteinID:
ASY28240
UniProt:
A0A249LGI1
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All DBs
Position
1237555..1238406
Genome browser
AA seq
283 aa
AA seq
DB search
MSHLEKEITTWFKMNKRDLPWRKTSAWGVLVSEIMLQQTPVARVEPIWHIWMKRWPTPKD
LAAASAADVIKEWGRLGYPRRALRLRECAQVIASDFNNKVPDNEIQLRKLPGIGDYTAAA
VMAFAFQERSLVLDINIRRLFSRIYDGVQSPTAAPNKTERAARAELVPTKNAHMWAAATM
ELGALICTAQKPKCEICPVADSCKWRSLNYPQSDQPKRTQAWNGTDRQCRGIIVQALREN
DSLTEKEIKKLWVLESQVEKALKTLLADGLITQSARSKYSLPN
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagccacttagaaaaagagatcaccacttggtttaaaatgaacaaacgtgatcttcca
tggagaaagacaagtgcatggggcgttttagtttcagaaataatgttgcagcaaactccc
gtcgcacgcgtagaacccatctggcacatttggatgaaacggtggccaactccaaaagat
ttagcagcggcgtctgcggctgatgtaattaaagagtggggacgactcggttatccacgt
cgtgcattgcgcttacgagaatgcgcccaagtaattgcgtcagattttaataacaaagtt
ccggataatgaaatccaactacgtaaattacctggcatcggtgattacacggcggcagcg
gttatggcatttgctttccaagaacgctcactcgttctggacatcaacatccgtcgcttg
ttctctcgtatctatgacggtgttcaatccccaactgctgcgcccaataaaacagagcgc
gcagcacgcgcagagttagtgccaacaaagaatgcacatatgtgggctgctgcaacaatg
gaactcggtgcgctgatttgtacggcgcaaaaacctaagtgtgaaatatgtccagtcgcg
gattcctgtaagtggcgatcacttaattacccacaatcagatcaaccaaagcgcacacaa
gcatggaatggcaccgatagacagtgccgcggaatcattgtgcaagcacttcgtgagaat
gattcactcacagaaaaagagattaagaagttatgggtactcgaatcacaagtagaaaag
gctttgaaaacacttctggccgatgggttaattacccaatcggccagaagtaaatactcg
ttacctaattag
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