Planctomicrobium limosum: SH527x_000734
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Entry
SH527x_000734 CDS
T11760
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
plio Planctomicrobium limosum
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GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
LOR
Big_2
Motif
Other DBs
NCBI-ProteinID:
XXQ91575
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All DBs
Position
1004461..1009341
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AA seq
1626 aa
AA seq
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MSQPVFPVPQPLRSAAPVPPGPVSIPPVQEYDELKASLGELTRPHYPRFQGGESPFRVNP
GNGNLSISFTIPTPIFSTLPPVFTYHSRAAAAEIGFGHGVANLYNPTVTSLSATSARVVD
GGGNSVTFTDKDGSGNYLSPPNSGNSLKAESGGGWTETRPDNFQRYYDSDGLLKRIISPA
GGRWTLLHTGDQLDAVVDPLLNRLTYLYDGSNNLRTIVDPAGRRTTFTIDGNNNLVGYQS
PDGSRTTLLYEPDHTVKAYIDSESHRTTFSYDTIRRIKSVLAPNGGRMTYSYGASNVVQT
PDGQRTTVLFNNAGNIAAVVDPLAARTTYLWTDNRITAQVNPLGHRTTLSYVTLMNGATR
PKSITNPLGQRTTLLYDGNSQLKTQVFPSGARHTFVWNGSGQRVAAIDMLGGRWTTLYHS
DGQILASINPLGIRGTNVYDGTGLRVAQIDPLGARTTTLHNANGMPTVIVDPLGARTTYL
RDNMNRTYATIDPLGNRTSTIYDAGGEPIATINQLGERTTTVYDSSGRVLATINPLGNRT
TNVYDLLGRRIVAIDPLNRRSTTVYDAANRVLSTVEPTGARTTFGYDLANRRIRTIDAAG
NITTTIYNADSRLIATIDPFGQRSTLAYNVLGEVVRTTNPLNHSTTTLYDSAARPIASIN
PLGNRSTTVYDTLNRAVAGVNPLGYRSTNVYDVANQRTAAIDPLNHRATVIYNANGNIIA
SIDGLNQRTTTVYDANQQPVATVNALGNHTTTIYDAAGRTKARVDAQNQRTTSIYDAAGR
TIAQVNALNHRTTTIYNAASDVLASVMPLGQRATQVYNSAGQRIATVDPLLSRITTVYDA
SGRPLAQVNPLGFRTTTVYDKTRVAASVDANGNRTTNIYDLAGRPLATVNALGHRTTQVY
DAAGRATAQINERNYRYTSTYDAAGQETQFIDPLNRRVTSTYDADGNQKTRTDARGYRTT
YVYDSRHFLTSRQYPDGSRATFTYNAVGARTTMENHTGRYTTTYDTLQRKLSVVTPVGKL
ITYSYDDLGRKSQMNVASAGMFTYSYDANNQLKAIRNPQDDRTSFSYDAAGRRTLKELAN
GTRATYLYDAASQVTRVANLKSDNSTISMFDYTYDSVGNQRTITTASGGLTTYSYDATYR
LTEEYRTSSELNWAGLSANDWDSLTATQWSTLDAGPGYRNTYSYDPTGNRTLTIKDGERT
TSTFDPANQNVYSLNPTGRTTYTFDPSGNRTGVQNPDSSRTTTSYDFENRDIRVELPASV
VNTMAYDPDGLRVLLQDSHGTTKFVYDNQQYLLQTDGSNAITAAYTQEPGSYSNLTSQYS
YNGSLWLPSYHHYDSLGNTAELTDADENVTDTYEYTAWGELFSKTGNTLNPFQYRGRYGY
YFIPDTGEIYVIMRTYDPVTGRWTTMDLFRFIDGLNMYLAYFIPNSLDPFGLNSTWWGIS
FGGTFYNGAGGGVTVDATVKTEPCCENGVIGTKAIYDGRIHGEVGIGLGIDVKILTAKLS
AQIIVAKVNLDFGTRCETECGNPIGAAPCCRTCVDIGFNTPLPQFPISSANIGFIVGLEV
SGSVSGSVRACYNFGGCPKPGLAIGFCASASMAASVTTGLLGTFGAEASFFSGCVAMTGT
EDMLDW
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagcctgtatttccagtgccacagccactgcgttctgctgctcctgttccacca
ggtcccgtcagtattcctcctgttcaggaatacgatgagttgaaggcctcccttggcgaa
ctgactcgcccacactatccgcgatttcaggggggtgagtccccttttcgggttaatcct
ggaaatggaaatctttcgatctcctttacgattccgactccgatcttttcgacacttcct
cccgtcttcacctaccacagtcgggctgccgcagctgagattggctttggacacggtgtt
gccaacctctataacccgactgtgacatccctctccgcaacctcagctcgagttgtggat
ggaggcggcaattcggtgacattcacggacaaagatggttccggcaactacctctcgccc
cccaatagtggcaattccctcaaagcagagtccggtggaggctggacagaaacccggcct
gacaactttcagcgttattacgattcagacggattgctgaagcgaatcatctcccctgct
ggtggacgatggacactccttcatacaggtgaccagctggatgccgtggtcgatccgctg
ctcaatcgtctgacttatctctacgacgggtccaacaacctgcgcaccattgttgatcct
gcagggcgaaggaccaccttcacaattgacggcaacaacaatctggtcggttatcagtcg
ccggacgggagccggacaacgctgctatacgaacctgaccacacggtgaaagcctatatc
gattccgagtcccatcgtaccacattctcatacgacaccattcggcgaatcaaatcggtc
ctggctcccaacggggggcggatgacctattcctatggcgcaagcaatgtggtccagact
ccggatggccagcggacgacggtcctcttcaataatgcgggaaatattgcggccgtcgtc
gatcctctggcggctcgaacgacctatctctggaccgacaatcgaatcaccgcgcaagtg
aacccgctggggcaccggacgacgctcagctatgtcaccctgatgaatggagcgacccgg
ccgaaatcgatcaccaatccgctcgggcagcgaaccacgttgctgtacgatggaaacagt
cagctcaagacacaggtctttccttcaggagcaagacacacgttcgtctggaacggatcg
gggcaacgcgtcgcggccattgatatgcttggaggccgctggaccacactctatcactcg
gatggacagattctggcttcgatcaacccgttggggattcgcggaacaaacgtctacgac
ggcaccggattgcgggtcgcccagatcgatccactgggtgcccggaccaccaccctccat
aacgccaacggcatgcccaccgtcatcgttgatccgctgggggcgcggacgacgtatctc
cgggacaacatgaaccggacctatgccacgatcgatccgcttggcaatcggaccagcacc
atctacgacgcgggcggtgaaccgatcgccaccatcaatcaactcggagaacggaccacc
accgtttacgacagttccggtcgggttttagcgacgatcaacccattgggaaatcgcacc
acgaatgtctatgacctccttggccgacgtattgtcgcaatcgatccactcaatcgtcgg
tctacgactgtgtacgatgcagcgaatcgcgtactgtccacggttgagcccacaggagcc
agaacaactttcggctatgatctggccaaccgccgcatccgcacgatcgacgctgctgga
aacatcacaacgaccatctacaacgctgactcccgtctcatcgccacgattgacccgttc
ggacaacggtccactctcgcttacaatgttcttggggaagtcgttcgcacgacgaatccc
ctaaatcacagcaccacgaccctctatgattcggcagccagaccgattgccagcatcaat
ccgctcgggaaccgcagcacaaccgtctacgacacactgaacagagcagtggctggcgtg
aatccgctaggatatcgcagcacgaacgtctacgacgtcgccaaccaacggacagccgca
attgatccgctcaatcatcgcgcgacagtcatttataatgcaaacggaaacatcatcgcg
tccattgatgggctgaatcaacggacaaccacggtctatgatgcgaatcagcaaccggtt
gccaccgtcaacgcactcggcaaccacacaacgacgatctacgacgctgcgggacggacg
aaagctcgcgttgatgcccagaatcagcgaacaacatccatctacgatgcagctggacga
actattgctcaggtgaatgctctgaaccaccggaccacgacgatctataacgcagcgagc
gatgtcctcgcgagtgtaatgccactcggacaacgagcgacccaggtttacaactccgcc
gggcaacgcatcgcgaccgtcgatcctctgttgagccgaatcaccaccgtttatgacgct
tcaggaagaccattagctcaggtcaaccctttgggcttccgcacaacgacggtctacgac
aaaacccgtgtggctgcaagtgtggatgccaatggaaaccggaccacgaatatctacgac
ttggctgggcgcccattggccacagtcaacgctctgggacaccgcacgacgcaggtgtac
gatgccgcaggacgagccactgcccagatcaatgagcgaaactaccgatacaccagcact
tacgacgctgcaggccaagaaacccagtttattgatccactcaaccgtcgggtgacctcc
acatatgatgccgatggcaaccaaaagacccgaaccgatgcccggggataccggacgacc
tacgtgtacgactcccgacattttttaaccagtcggcaataccccgatggttcccgggcg
acattcacgtacaatgcagtgggagcccgcacaaccatggaaaaccacactggccgatac
acgacgacctatgacacgctgcagcgaaagctgtctgtcgtcactccggtcggtaagttg
atcacttacagctacgatgacctgggccgcaaatctcagatgaatgtcgccagtgcggga
atgttcacatacagctatgacgccaacaatcagctgaaggcgattcgcaatccccaggac
gatcgcaccagcttcagctatgatgcggccgggagaagaacactcaaggaactcgccaat
ggcacccgggcgacctacctctatgatgctgccagccaggtgacacgggtggcaaatctg
aaatcggacaactcgacgatttcgatgttcgactacacgtatgattctgtcggtaaccag
agaactattaccacagccagtggtgggctgaccacttactcctacgacgccacctatcgc
ctgaccgaagaataccggacgtcaagtgaactcaactgggccggattatctgccaacgat
tgggacagtctcactgcaacccaatggagcactctcgacgcaggcccgggctatcggaat
acatatagttacgatccgaccggaaaccgcaccttaaccatcaaagatggtgaaagaacc
accagtacgttcgatcccgccaatcaaaatgtctactcactgaatcccactgggcgcacg
acgtacacctttgatccgagcgggaatcggactggtgttcagaatccggacagcagccgc
acaacgaccagctacgacttcgagaaccgtgacatccgtgttgaactgccagccagtgtt
gtcaacaccatggcttatgacccagatgggctgcgggtgctgctgcaggattcccatgga
acgacgaagttcgtctacgacaaccaacaatacctgcttcaaaccgacggcagcaatgcc
atcacggctgcctatactcaggaacctggctcctacagcaacctcaccagccaatacagc
tacaacggctcactctggctcccgagctatcaccattacgacagcctcggaaacacggcc
gaactgaccgacgctgacgagaatgtgacagacacctacgagtacaccgcctggggagaa
ctgttttcaaagaccggcaacacgctcaacccattccagtatcgcggtcgatacggctac
tatttcattcccgacaccggtgagatctacgtcatcatgcgaacgtacgacccggtcacc
ggccgatggaccacaatggatctctttaggttcattgatggactaaacatgtatctggcg
tactttataccaaattccttagatcctttcggacttaattcaacgtggtggggaatctcg
tttggcggtactttttacaatggcgccggaggtggcgttacggttgatgctactgtaaaa
accgaaccatgctgtgaaaatggagttattggaaccaaggcaatatatgacggacgcatt
cacggcgaggttggaattggactagggattgacgtaaaaatacttacggcaaaactttcc
gcacaaatcattgtcgcgaaagtaaatcttgatttcggcacaagatgtgaaacagaatgt
ggcaaccccataggggcagctccttgttgtcgaacttgtgtagacattggatttaacacc
ccattacctcagtttccaatttcttcagctaatataggatttattgtaggcttggaagtt
tctggttccgtatccggtagcgtcagagcttgctataactttggtggctgccccaaacct
ggattagcaattggattttgtgctagtgcgtcgatggcggctagcgttacaactggccta
cttgggacatttggcgcagaagcaagctttttttcaggatgcgttgcaatgactggaact
gaagacatgctggactggtga
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