Planococcus liqunii: QWY22_02795
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Entry
QWY22_02795 CDS
T10306
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pliq Planococcus liqunii
Pathway
pliq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pliq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QWY22_02795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pliq03019
]
QWY22_02795
03009 Ribosome biogenesis [BR:
pliq03009
]
QWY22_02795
Enzymes [BR:
pliq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QWY22_02795
Messenger RNA biogenesis [BR:
pliq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QWY22_02795
Ribosome biogenesis [BR:
pliq03009
]
Prokaryotic type
rRNA helicases
QWY22_02795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
GRP
CMS1
Helicase_RecD
NDK
AAA_30
DUF4422
Motif
Other DBs
NCBI-ProteinID:
WKA51555
LinkDB
All DBs
Position
536169..537680
Genome browser
AA seq
503 aa
AA seq
DB search
MVKFSELNISETTLKSVRRMGFEEATPIQEGTIRLGMEGKDIIGQAQTGTGKTTAFGIPL
IEKIDTKDGNVQGLVIAPTRELAIQVSEELYRLGQDKNVRILSVYGGQEISRQIRALKNR
PQIIVGTPGRLLDHINRRTLKLDNVNTLILDEADEMLNMGFIEDIQTIMSSVPEERQTLL
FSATMPDAIRRIAEKFMKTPEIVKIKSKEMTVENIEQFYVKSVEREKFDILSRLINVQQP
ELAIIFGRTKRRVDELAKALNIRGYVAEGIHGDLSQAKRMSVLKQFKAGKVDILVATDVA
ARGLDISGVSHVYNFDIPQDPESYVHRIGRTGRAGKKGVAVTFVTPREMGYLSIVERTTK
KKMEALIPPTADEAVLGQKRVAMEQLQEMTEKNNLGDYRTFAAEMLEKFDAVDLIAAALK
TMTKEPEDVPVSISEERPLPSRGGGGYKGKGGRSSGGGGYKGSRSTGSGRPSSSRSGSGA
GRRREGGSGSGAGRPGRTRRHEG
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaaattttcagagttaaatattagcgaaacaactttaaagtccgtacgacgcatg
gggtttgaagaagcaacaccaatccaggaaggtacgatccgtcttggcatggaaggcaag
gacattatcgggcaagcacagactggtactggtaaaacaactgctttcggtattccgttg
attgaaaaaatcgacactaaagatggcaacgtccaaggtttagttatcgcaccgacacgc
gaattggctatccaagtttctgaagaactttacagactgggccaagataaaaacgtgcgc
atcctttcagtatacggtggccaagaaattagccgtcaaatccgtgcacttaaaaaccgc
ccacaaattatcgttggtacacctggacgtcttttggatcacatcaaccgccgtacgctt
aaattggacaatgtaaacacattgatccttgacgaagcggacgaaatgttgaacatgggc
ttcatcgaagacatccaaacaatcatgtcaagcgttccagaagagcgccagactttgttg
ttctcagcaactatgccggatgcaatccgccgcattgcagagaaattcatgaagactcca
gaaatcgtaaaaatcaaatcaaaagaaatgactgttgaaaacatcgagcagttctatgtt
aaatcggtagaacgcgaaaaattcgacatcctttcacgcctaatcaacgttcaacaaccg
gaacttgcaatcatttttggtcgcacaaaacgccgggtggacgaattagcaaaagctttg
aatatccgcggctatgtagctgaaggaattcacggtgaccttagccaagcaaaacgtatg
tctgtattgaagcaattcaaagcaggcaaagtcgatatcttggttgcaactgacgtagca
gctcgcggacttgatatctcaggcgtatcacatgtatacaactttgatattccacaagat
cctgaaagctatgttcaccgtatcggccgtactggccgtgcaggcaaaaaaggagtcgca
gtcacgtttgtaacaccacgtgaaatgggctacttgagcatcgttgaacgcacaactaag
aaaaaaatggaagctttgatccctccgactgctgacgaggctgtattaggccaaaaacgc
gttgcgatggaacaattgcaagaaatgactgagaaaaacaacttgggcgactaccgtaca
tttgcggcagaaatgcttgagaagttcgatgcagttgatttgattgcagcagctcttaaa
acaatgacaaaagagccggaagatgtaccggtttctatctctgaagaacgcccattgcca
tcccgcggaggcggcggctataaaggcaaaggtggacgcagcagtggaggcggcggctat
aaaggcagccgttctactggatcaggccgtccatcttcaagccgttcaggttcaggcgct
ggacgccgtcgcgaaggcggaagcggaagcggtgcaggccgtccgggacgcactcgccgt
cacgaaggttaa
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