Planococcus liqunii: QWY22_04935
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Entry
QWY22_04935 CDS
T10306
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
pliq Planococcus liqunii
Pathway
pliq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pliq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QWY22_04935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pliq03000
]
QWY22_04935
Transcription factors [BR:
pliq03000
]
Prokaryotic type
Helix-turn-helix
Other families
QWY22_04935
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
HTH_19
DUF2854
Dopey_N
SUCH1_C
ISPD_C
Motif
Other DBs
NCBI-ProteinID:
WKA51953
LinkDB
All DBs
Position
989552..990790
Genome browser
AA seq
412 aa
AA seq
DB search
MNIGSVIKYYRTKNNLTQSQLADGICSISHLSKIESNTYTPHESTIQALLVKMGVQWEKE
VDRYKRLERQLGEFIDCSLHYDLATMERQYSQLEQENDYIQSSDLVNQYELYKFRYYIYQ
NDQAKAERQKQLLERLEGSFTAPEKWLHQFFRSLYYTMLHKTEESLRYLDGLDKGIQSIP
QKFEGEYYYQKARLLILHDRFEVSAHYAERAVQYYQLHHNYIRLLHAQLLLAINYTRRNL
LAQAGGIYEVLKRNAHLTGQQDLYNQTVYNFVELLKQKEEYQQAAELLHELKENVSRNSY
FYKAVLVSLLETKLERPVDAVPLIKELRELAAEPKDEYFRIYANYFEKRSFSQEDLWSYC
EEKMFPFFRKNGYIKEGKKVAAELIDYYQRNKEWEKAHFYRTYNERNGGEYL
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcggatctgtcatcaagtattaccgcactaaaaacaatctaactcagtcacaa
ttggcagacggcatttgctccatctcgcatttaagtaaaattgaatccaatacctataca
ccacatgaatcaaccattcaggcattattggtgaaaatgggtgttcagtgggaaaaagaa
gtagaccgctacaaacgcttggaacggcaattgggagaattcattgattgttccctgcat
tacgacttagctactatggaaaggcaatatagccagctggaacaggaaaatgattatatt
caatccagcgatttagtgaatcaatacgagctctataaattccgttattatatttaccaa
aacgatcaggccaaagcagagcggcagaagcaattgcttgaaaggttggaaggctctttt
acagcgcctgaaaaatggcttcatcagttttttcggtcgctttattacacgatgctccac
aaaacggaagaatcgctccgttatttggacggcttggataaaggaatccaaagcattcca
caaaagtttgaaggggagtattattaccaaaaagcccgtctgctgattttgcatgaccgc
tttgaagtgtctgcccattatgcagaaagagcggtccagtattatcagcttcaccacaac
tacatccggctgcttcatgcccaacttttgctggccatcaattacacaagacggaattta
ctggcacaggccggcggcatatacgaagtattgaagcgaaacgcccatttgaccggccaa
caggatttatataaccaaaccgtctataattttgtggaattattaaagcaaaaagaagaa
taccagcaagctgcagaacttttacacgaattaaaagaaaatgtttccaggaattcttat
ttttataaagctgtactcgtcagtttattggaaacaaagctggaaagaccggtcgacgcc
gtgccgctaatcaaggaattgcgcgaattggctgccgaacccaaagatgaatactttcgc
atatacgcgaactatttcgaaaagcgtagtttttcccaagaggatctttggtcctattgt
gaggagaaaatgtttccatttttcagaaaaaatggttatataaaagaaggaaaaaaagtt
gccgctgaactgatcgattactatcagcggaataaagagtgggagaaagctcatttctac
cgcacttataatgaacgaaatggtggtgaatatttatga
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