Planococcus liqunii: QWY22_07950
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Entry
QWY22_07950 CDS
T10306
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pliq Planococcus liqunii
Pathway
pliq03410
Base excision repair
pliq03430
Mismatch repair
pliq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pliq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QWY22_07950 (recJ)
03430 Mismatch repair
QWY22_07950 (recJ)
03440 Homologous recombination
QWY22_07950 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pliq03400
]
QWY22_07950 (recJ)
DNA repair and recombination proteins [BR:
pliq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
QWY22_07950 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QWY22_07950 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QWY22_07950 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
DSPc
Motif
Other DBs
NCBI-ProteinID:
WKA52479
LinkDB
All DBs
Position
1571814..1574156
Genome browser
AA seq
780 aa
AA seq
DB search
MIESKKRWRLTTPDMERVQAIQTELSISSVLAKILVTRGITTAEEARNFMNMDAHGIHNP
YLMKDMDIAVGRIRQAIEEQQKILVYGDYDADGVTSTTVMMTVLEDLGADVSFKIPNRFK
HGYGPNEELFQEAHDEGVNLIITVDNGISGIDEVAFANSLGMEVIISDHHDIGETMPAAL
AIVHPRHPEGNYPFGELAGVGVAFKIAQALYEEVPDHLVELVAIGTIADLVPLHDENRIL
VKMGLEALRDTPRPAIDALSEVSGVKQREITEETIGFMFGPRINAIGRLQDADPAVQLFM
TDDASEARSLAGGLDVLNKERQAIVKQISDEATAQVDARYPDGPPHVIVVAQEGWNPGVV
GIVASKLVEKYYRPTIVLSLNPETDKAKGSARSIEGFHLYNELAANRDILPHFGGHPMAA
GMTLDMEHVDALRDRLNKQAETSLTEEDLIPVVEIDIPVRLEEIDIETIESMRYLAPFGM
GFAKPKFFLDEVKVASIRKIGAAQNHLKMELAQNAATIDAVGFGIGPLGDELTPDVKIDV
IGDLQINEWNGRKKPQLMIEDIRTDEWQLFDIRGIRQVSRWSKLIPEKEQVFLAFKPETV
AVFQTLLQQPIYTPETLEELAEPKFHLVLLDLPDTEEQLAEVLTHINPKRIYAHFYAKES
QYFEQIPTREQFAWLFAFIKKRGSFDFKKHSDELAKHKGWTREALFFMLQVFFELGFVTL
NNGLTEIAAATGKRDLSEAPIYKKRQQQIALEQKLLYASYKDLKEWFDAKVSAKEEELWI
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgatagaatccaaaaagcgatggcgcttgaccactcccgatatggagcgggtgcaagcg
attcaaacagaattatccatttcgtccgttttggccaaaatattagtgacgcggggcatt
acaaccgctgaagaagcacgcaacttcatgaacatggacgcacacggaatacataaccca
tatctcatgaaagatatggacattgccgtcgggcgcatccgccaagccattgaagaacaa
cagaaaattttagtgtacggcgactatgatgccgatggagttacgagcacgaccgtcatg
atgacagtgctcgaagacctcggtgctgatgtttcttttaagatcccgaaccgatttaag
catggctacgggccgaatgaagaattattccaggaagcgcatgatgaaggcgtgaacttg
atcatcactgtcgataacggcatttccggcatcgacgaagtggcgtttgccaatagcctt
ggcatggaagtcattatcagcgaccatcacgacatcggtgaaacgatgccggctgcactg
gcgattgtccacccgcgccatcccgaaggcaattacccgttcggtgaactggcaggtgtc
ggtgtggcgttcaaaattgcccaggcgttgtatgaagaagtgccggaccacctggtggaa
ttggtggcaatcggtaccattgccgatttggtgccgttgcacgatgaaaaccgcattctc
gtgaaaatgggcttggaagcgctgcgggacacgccgcgtccggctatcgacgctttatca
gaagtgtccggcgtgaagcagcgcgaaattacggaagaaacgatcggctttatgttcggt
ccgcgcatcaacgcgattggccgccttcaggatgccgatccggcggtgcaattgtttatg
accgatgatgcttcggaagcccgcagccttgctggagggcttgatgttttgaacaaagag
cgccaggccatcgtcaagcagatttcagatgaagcgaccgctcaggtggatgcccgttat
ccggatggccccccgcatgtcattgtggtggcgcaggaaggctggaacccaggcgtagtc
gggattgtggcttcaaagctggtggagaaatattaccgcccgacgattgtattgtccctg
aatccggaaaccgacaaagctaaaggctccgcccgaagcattgaaggcttccatttgtac
aatgaactggcagcgaaccgcgacatcctgccgcatttcggcggacatccgatggcggcc
ggcatgacactcgatatggaacatgttgatgcgctgcgcgaccgtttgaacaagcaggcg
gaaacgagtttgaccgaagaagatttgattcccgttgtggaaattgatattcccgtccgc
ttggaagaaatcgatatcgaaacgattgaatcgatgcgctatttggcgccgtttggcatg
ggatttgccaagccgaagtttttcctggatgaagtgaaagtggcatccatccggaaaatc
ggcgcagctcaaaatcatttaaaaatggagctggcccaaaacgcggcgacaattgatgcg
gtcggtttcggcattggccctctcggcgatgaactgacgccggatgtgaaaattgatgtc
atcggcgaccttcaaatcaacgaatggaacggccgcaaaaagccgcagctgatgatcgaa
gatatccggaccgatgaatggcaattattcgacatccgcggcatccggcaagtgtcgcgc
tggtcgaagctgattccggaaaaagagcaggtcttcctggcgtttaagccggaaaccgtt
gccgtgttccagacgcttttgcagcagccgatctatacgccagagacgctggaagagctc
gctgaaccaaaattccatctggtgctcctggatttgccggacaccgaagagcaattagcc
gaagttttgacacatattaatccgaagcggatctatgcccatttttacgcaaaagaatcg
cagtatttcgagcagatcccaactcgggagcagtttgcgtggctgtttgcgttcataaaa
aaacgcgggtcgttcgatttcaaaaagcatagcgatgagctagcgaagcacaaaggctgg
acgcgggaagcattatttttcatgcttcaggtgttttttgaactcggttttgttacactt
aacaatggacttacagagattgcagcagctacaggcaagcgggatttgtcggaagcgccg
atttacaagaagcgccagcagcaaattgcgttggaacaaaagcttttgtatgcatcttat
aaggatttaaaagagtggtttgatgcgaaagtgtctgccaaggaggaagaattatggatt
taa
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