Planococcus liqunii: QWY22_12020
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Entry
QWY22_12020 CDS
T10306
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pliq Planococcus liqunii
Pathway
pliq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pliq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QWY22_12020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pliq03019
]
QWY22_12020
03400 DNA repair and recombination proteins [BR:
pliq03400
]
QWY22_12020
Enzymes [BR:
pliq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QWY22_12020
Messenger RNA biogenesis [BR:
pliq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QWY22_12020
DNA repair and recombination proteins [BR:
pliq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QWY22_12020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
WKA49628
LinkDB
All DBs
Position
complement(2370270..2371694)
Genome browser
AA seq
474 aa
AA seq
DB search
MKLEEVLFSAYGFSSFRPGQREVIEQVIKGKDVVALLPTGMGKSMCYQLPAHILPGTVLV
VSPLLSLMQDQVAQLKKMGEKSVVAINSFLKPQEREKIWQTLGSYRFIFISPEMLVQPFV
KKQLEKICVSLLVADEAHCISQWGFDFRPDYLRIAEILPILKFPQVLALTATATEKVTQE
IKAYLKLDEPFIYKHSMDRKNIVYDIKKFEDSRQKLEWLTSFVRKSAGPGIIYAGTRRKS
QELAAILMDQGISASYYHGGMEHQDRVFVQQQFQNGELDWVCSTNAFGMGVHISNIRHVV
HFQLPTSVEGYVQEVGRAGRDGEAALATLLYAEGDEGLLQSLVMDELPTRHEIQQVASHP
AGADQLVADGIVRETALRVIAYWLSRLSESETLRQMEFLQREKIKQVDKMKKLVNLQSCI
REYIIECFDQHLKGKPENCCVNDGIDYSVFGKRLEKPQKVVLESWQNRLNALLP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagaagaagtgcttttttccgcctacggcttttcttcattccggcccggacag
cgggaagtgattgaacaggtcataaaaggcaaagacgtggttgcgcttttgccgaccggc
atggggaagtcgatgtgctatcagctgcctgcacatattctgccaggcacggtactggtc
gtctcgccattgctgtcgctgatgcaagaccaagttgcccagttgaaaaaaatgggggag
aagtctgtagtggccatcaactcctttttgaaaccacaggaaagagagaaaatttggcag
acacttggcagttaccgttttattttcatctcgccggagatgctggtccagccttttgtc
aaaaaacaattggaaaaaatctgcgtttctttgcttgttgcagatgaagcccattgcatt
tcgcaatggggatttgattttcggccggattatctccgcattgcggaaatccttccgatc
ttgaagtttccgcaagtgctggcactgaccgctacagcaacagaaaaagttacccaggaa
atcaaagcatatttaaaacttgatgagccttttatatataagcattcgatggaccggaaa
aatattgtctatgatataaagaaattcgaggattctcggcagaagttggaatggctcacg
tcttttgtccgcaaaagtgcaggcccgggaatcatttatgccggaacgcgtagaaagtcg
caggaacttgccgctattttgatggaccagggaatttccgcttcgtactatcatggcgga
atggaacaccaagaccgcgtgtttgtgcagcagcaattccagaacggtgaattggactgg
gtttgctcgaccaatgcattcggcatgggcgtccatatttcaaacatccggcacgtcgtg
cattttcaattgcccacttctgttgaagggtatgtccaggaagtaggaagagcggggcgt
gacggcgaagcggcgcttgccactttgctttatgcagaaggcgatgaaggcttgctgcaa
agccttgttatggacgaattgccgacgcggcatgaaatccagcaagtcgcttcccatcca
gccggcgcagaccaattggtggctgacggcatcgtgagagaaactgcattgcgcgtcatt
gcttattggctgagccggttgagcgaatccgaaaccttgcgccaaatggaatttcttcaa
agggaaaaaatcaagcaagtggataaaatgaagaaattggtcaatctccaaagctgcatc
cgggagtatatcatcgagtgctttgaccagcacttgaaaggaaagcccgagaattgctgc
gtgaatgacggcattgattatagtgtttttggcaagcgcctggagaaaccgcagaaagta
gtacttgagagctggcaaaatcgtctaaatgcactattgccttaa
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