Planococcus liqunii: QWY22_12670
Help
Entry
QWY22_12670 CDS
T10306
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pliq Planococcus liqunii
Brite
KEGG Orthology (KO) [BR:
pliq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pliq03032
]
QWY22_12670 (topA)
03400 DNA repair and recombination proteins [BR:
pliq03400
]
QWY22_12670 (topA)
Enzymes [BR:
pliq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QWY22_12670 (topA)
DNA replication proteins [BR:
pliq03032
]
Prokaryotic type
DNA Topoisomerases
QWY22_12670 (topA)
DNA repair and recombination proteins [BR:
pliq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QWY22_12670 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
DUF2996
Motif
Other DBs
NCBI-ProteinID:
WKA49755
LinkDB
All DBs
Position
complement(2502374..2504443)
Genome browser
AA seq
689 aa
AA seq
DB search
MSDYLVIVESPAKAKTIERYLGKKYKVRASLGHLRDLPRSQMGVDVENNYEPRYITIRGK
GPILQDLKKEAKKAKKVFLAADPDREGEAIAWHLANALGVDQSTECRVVFNEITKDAIKE
SFKHPRKIDMDLVDAQQARRILDRLVGYSISPLLWKKVKKGLSAGRVQSVALGLIIDREN
EIKNFEPEEYWSITGEFEKAKKKFEAQFYGTADEKVKLQNESDVKAVMASMKGKDFSVNR
VVKKERKRNPSPSFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIQIGKEGITGLITYMR
TDSTRISDTAKKDALDFIVGNYGEDYVTKAAAAKQSAKSQDAHEAVRPTSVLRTPESVKS
ILSRDLYRLYKLIWDRFVASQMSPAVLDTVMAELQNGDAVFRANGSQVKFPGFMKLYIEG
TDDQTEDKDNILPEMAEGDTVKAVAIEPKQHFTQPPPRFTEARLVRTLEELGIGRPSTYA
PTLDTIQKRGYVALDAKRFIPTELGEIVHSLVSEFFPDILNIEFTAKMENDLDSVEDGEI
DWRAIIDLFYLDFEKDLRVAEEEMEKVQIKDEPAGEDCEQCGSPMVFKLGRYGKFMACSN
FPDCRNTKAIVKHIGVTCPTCKEGEIVERKSKKRRIFYGCERYPECDFVSWDKPIERPCP
KCAQLLVEKKVKKGVQINCTNCDYKEEVQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattatttggtaattgttgaatcgcctgccaaggcgaaaacaattgaacgatat
ttagggaaaaagtacaaagtccgtgcatctcttgggcatttgcgggatttgccccgcagc
caaatgggtgtggatgttgaaaataactacgaaccccgttatatcaccatcagaggcaaa
ggcccaattttacaagacttaaaaaaagaagcgaaaaaagcgaagaaagtctttctcgca
gctgacccggatcgcgaaggggaagcaattgcttggcatttggccaatgccctcggcgtt
gaccaaagcactgaatgccgagtcgtgttcaacgagattacaaaagacgccattaaagaa
tcatttaaacacccgcggaaaattgacatggatttagttgatgcccagcaagcccggcgg
atactcgatcgcctggtcggatacagcatcagtccgctgctttggaaaaaagtaaaaaaa
ggcttgtcggctgggcgcgtccagtcggttgctctcggcttgatcatcgaccgggaaaat
gagatcaaaaacttcgaaccggaagaatactggtccattacaggcgaatttgaaaaagcg
aaaaagaaatttgaagcacaattttatggaactgcagatgaaaaggtcaaattgcaaaac
gaaagcgatgtaaaagcagtaatggcatcgatgaaaggcaaagacttttcggtaaaccgt
gttgtgaaaaaagaaagaaagagaaatccttccccttcttttacaacttcttccctccag
caggaggcagcccgcaaattaaatttccgtgctaaaaagaccatgatgcttgcccagcaa
ttgtacgaaggcattcaaatcggcaaagaaggcataacgggattgattacgtacatgcgt
accgattccacccgcatctccgataccgcgaaaaaagatgcacttgattttattgtgggt
aattacggcgaagattatgtgacaaaagcagccgctgcaaagcagtccgccaagtcgcag
gatgcccacgaagcggttcgccccacaagcgtgctgcggacgccggaatcggtgaagagc
atcctatcccgtgacctgtaccgattgtataagctgatctgggaccgctttgttgccagc
cagatgtcgccggctgtgcttgacaccgtgatggcagaactccaaaacggagatgctgtt
ttccgtgccaacggttcacaagtgaagtttcccggttttatgaagctttatattgaagga
actgacgaccaaacggaagacaaagacaatattttgccggaaatggccgaaggtgatacg
gttaaagcggtggccattgaaccgaagcagcatttcacacagccgcctccgcgctttaca
gaagcccgtttggtccgtacgctcgaagaactgggcataggccgtccgtcaacgtatgcg
ccaacactggataccatccagaagcgcggctatgtagcgttggatgctaagcgctttatc
ccgaccgaactgggagaaatcgtccatagtctggtcagtgaatttttcccggatatcttg
aatatcgagtttactgcaaaaatggaaaatgacctcgatagcgtagaagatggggaaatt
gactggcgtgccattatcgacttgttctatctggatttcgaaaaagatctccgggtcgca
gaagaagaaatggaaaaagtgcagatcaaagatgagcctgccggagaagattgtgaacaa
tgtggttcaccgatggtctttaaactgggccgctatggcaaattcatggcgtgcagcaat
ttcccggactgccgcaatacaaaagcaatcgtcaaacacatcggcgtgacatgcccaact
tgtaaagaaggcgaaattgtcgaacggaaaagcaagaaacgccggatcttctatggctgt
gaacgctatccggaatgtgactttgtgtcatgggacaaaccgattgagcggccgtgtccg
aaatgtgcgcagctgcttgtagaaaagaaagtgaaaaaaggcgtgcagatcaactgcaca
aactgtgattacaaagaagaagttcaataa
DBGET
integrated database retrieval system
