Planococcus liqunii: QWY22_14025
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Entry
QWY22_14025 CDS
T10306
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
pliq Planococcus liqunii
Pathway
pliq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pliq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QWY22_14025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pliq03000
]
QWY22_14025
Transcription factors [BR:
pliq03000
]
Prokaryotic type
Helix-turn-helix
Other families
QWY22_14025
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_MalT
TPR_8
HTH_3
TPR_INTS8_3
HTH_31
TPR_11
HTH_19
Motif
Other DBs
NCBI-ProteinID:
WKA50011
LinkDB
All DBs
Position
2780874..2782331
Genome browser
AA seq
485 aa
AA seq
DB search
MRTIDKLRKTQVVEADIIVLNNLSTFNFSEAAAMLEKNSPTWMTDIMPIQMERRESMNTG
LRLKYHRLKKRISLEETASGILSSRELKKIESGLKEPSLRDLEALCKKLGISLAPKENPI
GHVLVKNFKTSLLHPQNKGKIMEQYADIHDHPLLFVNEDIELEYNIQQIRYFIITGDLDS
AEEKLKEMDRFKEFMNQEQFYLFHKYKGNYHYILNDFETALKTYQMAEKIAPNGSSSSEK
GDLFYSIGITATQCWETELAFQYTEMALKIYQQEFIPKRIVECHINMGITHNRLGNYKIS
IEHYQNASTIGRKLEVEILKFTTEYNLGYNYFLNQQYELAKEHMETALTFIPPEYIADSL
LSYCLIIMSDLELDNLESAKKCGEKGLTLIKSKNLSLDSPTNQAFKESYIQFMCLIHLIN
NNFKEFKHLTLNYLIPSLENHKNFYELGYFYSQLGNVYYKQALYEKSAEYYRNSQRAYKN
LIRKS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaggactatagataagttacgtaaaacacaagttgtggaggcggatattatagtactt
aacaatctttcaacttttaatttttcagaagccgctgcgatgttggaaaagaactctcct
acatggatgaccgatataatgcccattcaaatggaaaggagagaatcaatgaatactggt
ttacgcctcaaataccataggctgaaaaaaagaatcagcctagaagaaaccgcttcaggg
attctctcatcgagagaattgaaaaaaatagaatcgggccttaaagaaccgtctttgcgc
gatttagaagcgttgtgcaaaaagcttggaatttctttggctccaaaagaaaatccgatt
ggccatgttttggtcaagaactttaaaacttcattgctccatccacaaaacaaaggaaag
atcatggaacagtacgccgatatccacgatcatcctttgttgtttgtaaatgaggatatc
gagctggaatacaacatccagcaaatccgctatttcataattacaggagatttggacagc
gcggaagaaaagttgaaggaaatggatcgctttaaggaatttatgaaccaggagcagttt
tatctgtttcataagtataaagggaattatcattacatcttaaatgattttgaaacagca
cttaaaacatatcaaatggccgaaaaaatagctcctaatggttctagttcttcagaaaaa
ggagacctattctactctatcggaataacagccacacaatgttgggaaacagaactagct
tttcaatatacagaaatggctctgaaaatttatcaacaagaattcatccctaaaagaatc
gttgaatgccatatcaatatgggaattactcataatagattaggcaattataagatatct
atagagcactaccaaaatgcttcgacaattggaagaaaacttgaggttgagattttaaag
tttactacggaatataaccttggctataactatttccttaatcagcaatatgaattagca
aaagaacatatggaaactgctttaactttcattcctcctgaatatatcgctgatagtctg
ttaagctattgcttaattattatgtcagatttagaactagataacttggagtcagcaaaa
aaatgtggagaaaaagggcttacactcattaaatctaaaaatttaagtttagattctccc
actaaccaggcttttaaagaatcttatatacagtttatgtgtttaattcacttaataaat
aataactttaaagagtttaaacacttaacactgaattatttaatcccaagtttggagaat
cacaaaaatttttatgaactgggatatttttatagtcagctgggtaatgtatactacaaa
caagccctttatgaaaaatctgcagaatattacagaaactctcaaagagcttacaaaaat
ttaattagaaaaagctga
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