Planococcus liqunii: QWY22_15635
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Entry
QWY22_15635 CDS
T10306
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
pliq Planococcus liqunii
Pathway
pliq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pliq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QWY22_15635 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pliq03021
]
QWY22_15635 (rpoE)
03400 DNA repair and recombination proteins [BR:
pliq03400
]
QWY22_15635 (rpoE)
Transcription machinery [BR:
pliq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QWY22_15635 (rpoE)
DNA repair and recombination proteins [BR:
pliq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QWY22_15635 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
BUD22
Motif
Other DBs
NCBI-ProteinID:
WKA52988
LinkDB
All DBs
Position
complement(3163544..3164143)
Genome browser
AA seq
199 aa
AA seq
DB search
MKIRELSREELIEESFVDLTYAMLQETHETKTYPELVTEIENLLGLSKEDMKARLVQFYT
DMNIDGRFLILGENRWGLREWYPVEQIEEESAPTVKARKKKAKVADDEGFDDMDLELEDE
LEFDDFDDADDEDEDDDASALIIPPVGDEEEEEEVIDFDVDVDDDDDDEVDVDVLVEDLD
GNIIDDEEEEEDDLEDDLK
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatccgtgaattatcgagagaagaactaatcgaagagtcatttgttgacttaaca
tatgcaatgctccaagaaacacacgaaacaaaaacttaccctgagcttgtcacagaaatt
gagaacttgcttggtttgtcaaaagaagacatgaaagcccgccttgtccagttctataca
gacatgaacattgatggccgcttcctgattctaggtgaaaaccgttggggcctccgtgaa
tggtatccagtggagcaaattgaagaagagtctgcaccaaccgttaaagcccgcaagaaa
aaagcgaaagtggcggacgatgaaggctttgacgatatggaccttgaattggaagatgag
ttggaatttgacgatttcgatgatgctgacgacgaggatgaagacgatgacgcaagtgca
ttgatcatcccgccggttggtgatgaagaagaggaagaagaagtcatcgattttgatgta
gacgtggatgacgatgatgacgatgaagtcgatgtagacgttctggtggaagacctggac
ggcaatattatcgacgacgaagaagaagaggaagacgatttagaagacgatttgaagtaa
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