Planococcus liqunii: QWY22_16325
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Entry
QWY22_16325 CDS
T10306
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pliq Planococcus liqunii
Pathway
pliq03420
Nucleotide excision repair
pliq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pliq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QWY22_16325
03430 Mismatch repair
QWY22_16325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pliq03400
]
QWY22_16325
Enzymes [BR:
pliq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QWY22_16325
DNA repair and recombination proteins [BR:
pliq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QWY22_16325
MMR (mismatch excision repair)
Other MMR factors
QWY22_16325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
WKA50449
LinkDB
All DBs
Position
complement(3307437..3309563)
Genome browser
AA seq
708 aa
AA seq
DB search
MSNFFERKQKQLGVELNKIQRKAVERTEGPLLLLACPGSGKTTTMIMRVGYLIEEKKVQP
HRIKAITFSKASAIDMQERYKRFFPKLAPVDFSTIHSLAFQITREYFAESRYVMIEGSES
HGLHKKRLLREMFETEVGEPITEDQLDELTSFISFVKNKMTPREQWKKLDAPFEGAIEIL
KTYEAFKENYDVRLVDFDDMLSLANEALEKDADLLAKYQNRWDYVMTDESQDTSMIQHAI
VEKLVARHKNLCVVADDDQSIYTWRAAEPTYLLKFKNVYPDAYVMKMERNYRSSKNIVEA
ANLFIKTNKKRHDKNMFTKQPEGDPIVIRRLASEEAQLKYVMKELKELKHFGDVAILYRN
NSSSTLLMSELDRLGIPFYMKDADNRFFSHWIVEDMLNFMRFSLKPERIDIYAKIASKTN
AYWSGSQLKQLSRMKPTVKNAFDEINLNITLKDYQLKILAEQKKWFDALNGMKPLKVIRT
IRADLGYDQMLASRAEKFGMRLQYLEQILITLEQIAEPLSSMTEFAKRLKELEQVTQNAK
AEKTEDMLTLSTFHSSKGLEFERVYMIDLVEGIIPTEEDAENPDTLEEARRLFYVGMTRA
KKHLELISYDSESRFVDEVRDIVVPEKSVAQKTRTVAKTPIKVDVPDNPNAAKREDELLE
GARVRHRVFGTGKIIERDHERISIQFAKERKELLIDICLSYKLLEVLD
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatttttttgaacgcaaacaaaaacaactcggagtggaactgaacaaaattcaa
cgcaaagccgtcgagcggacagaagggccgctgctcttattagcgtgtcccggatcgggc
aaaacaacaacgatgattatgcgtgttgggtatttgattgaagagaaaaaagttcagccg
caccgcataaaagccatcacgttcagcaaggcatctgccatcgatatgcaggaacgctat
aaacgttttttcccaaagctagcaccggttgatttctcgacgatccatagcctcgctttc
caaatcacgcgggaatactttgcggaatcccgttacgtaatgattgaaggcagcgaatcg
cacggccttcataaaaagcggctgctgcgtgaaatgttcgaaacggaagtcggagaaccg
attaccgaagaccagctggatgaattgacttcgttcatcagttttgtgaaaaacaaaatg
accccaagggaacaatggaaaaagttagatgcgccttttgaaggggcaattgagatctta
aagacgtacgaggcatttaaagaaaactacgatgtccgcttggtcgattttgatgatatg
ctttccctcgcaaatgaagcgctggaaaaagatgcggatctgcttgcgaagtaccagaat
cgctgggattatgtcatgaccgatgaaagccaggacacttcgatgatccagcatgccatc
gtggaaaaactggtggcccgccataaaaacctgtgcgtggtcgcagatgatgaccagtcg
atttatacatggcgtgctgcagaaccgacttatttgctgaaatttaaaaatgtgtatccg
gacgcctatgtgatgaaaatggagcgcaattaccgctcctccaaaaacattgtagaggcc
gcgaatttattcatcaaaacgaacaaaaagcggcacgacaaaaacatgttcaccaagcaa
ccggaaggagatccgattgtcatccggcgccttgcttcagaggaagcgcagttgaagtat
gtgatgaaggaactgaaagaactgaagcattttggcgatgtggccatcctttaccgcaac
aattcctcttcgacacttttgatgagtgaactggaccgcctgggcattcctttttatatg
aaagatgcggacaaccgtttcttctcgcactggattgtggaagacatgctgaattttatg
cgcttcagcttgaagccggaacgcattgatatttacgcgaaaattgcttcgaaaacaaat
gcctactggtcgggcagccaattaaagcagttgagccgcatgaagccgacggtgaaaaac
gcgttcgatgaaatcaatttgaacattacgctgaaggactaccaactcaaaattcttgcc
gagcagaaaaaatggtttgatgcattgaatggcatgaaacccctaaaagtgattcggaca
atccgggcggatctgggatacgatcaaatgcttgcgagccgtgctgaaaaattcggtatg
cgcctgcagtatttggagcagatcttaattacgctggaacaaattgccgaaccgctttca
agcatgactgaatttgcgaaaagattgaaggaattggagcaagtcacccaaaatgcaaaa
gccgaaaaaaccgaggacatgctgactttatccactttccacagttccaaaggcttggaa
tttgaacgggtgtatatgattgatctggtggaaggcatcatcccgaccgaggaagatgca
gaaaaccccgacaccttggaagaagcacggcggttgttttacgtcggcatgacgcgtgcc
aaaaagcatttggaactgattagctatgacagcgagtcccgctttgtggatgaagtgcgg
gatattgtagtgccggagaagtcggtagcccaaaaaacccggacggtcgctaagacaccg
attaaagtggatgttccggataacccgaatgccgctaagagggaagatgaacttttggaa
ggggcaagagttcgccaccgtgtttttggcacgggcaaaatcattgaacgggatcatgag
cgcatctcgatccaatttgccaaagagcggaaagaattgctgattgatatttgtttgagc
tataagttattggaagtactggattaa
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