Planococcus liqunii: QWY22_17165
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Entry
QWY22_17165 CDS
T10306
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pliq Planococcus liqunii
Pathway
pliq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pliq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QWY22_17165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pliq03019
]
QWY22_17165
03009 Ribosome biogenesis [BR:
pliq03009
]
QWY22_17165
Enzymes [BR:
pliq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QWY22_17165
Messenger RNA biogenesis [BR:
pliq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QWY22_17165
Ribosome biogenesis [BR:
pliq03009
]
Prokaryotic type
rRNA helicases
QWY22_17165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
UvrD-helicase
NAT10_TcmA_helicase
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WKA50610
LinkDB
All DBs
Position
complement(3467852..3469297)
Genome browser
AA seq
481 aa
AA seq
DB search
MNEKRFEEYNISEPILRALEGLGYTKPTEVQEKVIPSALSKTDVAVKSQTGSGKTAAFGI
PICELVDWEENKPQALILTPTRELADQVKEDITNIGRFKRIKAAAVYGKQPFAYQQAELK
QKCHVVVGTPGRVMDHIERGTLNLSRIEYLVLDEADEMLNMGFIEQVEAIINKLPAERTT
MLFSATLPENVENLQRKYMNNPEHIEIASTETLTDRIEHSLYRVEEKKKFALLRDMTIVE
NPDSCIIFCRTKDNVDFVVEQLEKHDYTCDKLHGGMMQEDRFAVMNEFKRGEFRYLVATD
VAARGIDIDSITHVVNFDVPLEKESYVHRAGRTGRAGKKGKAITFATPYEDKFLAEIEAY
IGFEIPERSAPSAEEIGSAKPAFQEKMESRPALKKNKNEQVNKDILKLYFNGGKKKKLRA
FDFVGTLTSIPGVTAEDIGIIKIQDTVTYIDILNGKGPMVLKAMKDKTIKGKTLKVHKAN
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaaacgatttgaagaatataacatcagtgaaccgatactgcgggcccttgaa
ggattgggatatacgaagccgacagaagtgcaggaaaaagtcattccgtctgcactttca
aagactgacgttgcggtaaagtcgcagacaggcagcgggaaaaccgcagctttcggtatt
cccatctgtgaattggtcgactgggaagagaacaaaccgcaggcgcttattttaacgccg
acgcgggaactggccgatcaggtaaaagaagacattaccaatatcggacgcttcaagcgc
atcaaagcggcagcagtctatggtaaacagccttttgcttaccagcaggcagaattgaaa
cagaaatgccacgtggtcgttgggacccctgggcgtgtaatggaccatatcgaacggggt
acgctgaacttgagccggattgaatacttggtgctggatgaagcggacgaaatgctcaat
atgggctttattgaacaagtggaggccattatcaacaagcttcctgctgagcggacgacc
atgctgttttcggcgacgctgccggagaacgtggagaatcttcagcgcaaatacatgaac
aatcctgaacatattgaaattgcttccactgaaaccttgacggaccggattgagcattcg
ctttaccgggtggaagaaaaaaagaaattcgcattgctgcgggatatgacgattgtagaa
aacccggacagctgcattattttctgccgcacgaaagacaatgtcgactttgtggtggag
cagcttgaaaaacacgattacacttgcgataaattgcatggcggcatgatgcaggaagac
cgtttcgccgtcatgaacgagtttaagcgcggcgagttccgctatttggtggcgacagat
gtagcggcccgtggaatcgacatcgacagcatcactcacgtggtcaatttcgatgtaccg
ctcgaaaaggaaagctacgtgcaccgtgccggcagaaccggacgcgccggcaaaaaaggg
aaagccatcacatttgccacaccttacgaagacaaattcctggcagaaatcgaagcttat
atcggttttgaaattccggagcggagtgcaccgtcagccgaagagatcggctcagcaaaa
ccggccttccaggaaaagatggaaagccgtccggcgctgaaaaagaacaagaacgagcaa
gtgaacaaagatatcttaaagctgtatttcaacggcggcaaaaagaagaaattgcgggca
ttcgactttgtcggcacgctcaccagcattccgggtgtgacggcagaagacatcggaatc
attaaaattcaggacaccgtaacgtatatcgatatcctgaacggcaaagggccaatggtg
ctgaaagcgatgaaagacaaaaccataaaagggaaaaccttaaaagtccataaggcaaat
aaataa
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