Planococcus liqunii: QWY22_18230
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Entry
QWY22_18230 CDS
T10306
Symbol
helD
Name
(GenBank) RNA polymerase recycling motor HelD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pliq Planococcus liqunii
Pathway
pliq03420
Nucleotide excision repair
pliq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pliq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QWY22_18230 (helD)
03430 Mismatch repair
QWY22_18230 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pliq03400
]
QWY22_18230 (helD)
Enzymes [BR:
pliq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QWY22_18230 (helD)
DNA repair and recombination proteins [BR:
pliq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QWY22_18230 (helD)
MMR (mismatch excision repair)
Other MMR factors
QWY22_18230 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_22
PhoH
AAA_16
AAA_30
SLFN-g3_helicase
DEAD
NACHT
TMF_DNA_bd
ResIII
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WKA50810
LinkDB
All DBs
Position
complement(3692650..3694980)
Genome browser
AA seq
776 aa
AA seq
DB search
MNLEFQKEQKRVDRVMQEVTGQLRRLEADTSRQKDDVVNIRRHFWDENKISLDSFDDFLE
TIIGLRQEAQALSVSETTHRQSTKKLAELRSMQRTPYFGRIDFQEEDEPEKEEVYIGIST
LTDSTGDEFLVYDWRAPVSSVYYDHQPGPASYSTPGGEVRGHLEKKWQYLIRSGVLESMF
DTSLTIGDEILQQVLGKSADKKMHSIVATIQQEQNRIIRHDRTRLLIVQGAAGSGKTSAA
LQRIAYLLYKYRDQLNADQIILFSPNAMFSSYVSNVLPELGEENMHQVTFQEYLNHRLSA
QFELENPYGQLEYVLTKRDDPAYAARVAAIRFKASVQFFEAIKSYRRTLEESGMIFKRIR
FAGHPIASAEAIEARFYSRDTTLRFHNRLEGLKDWLLKELDEFEKQEWEEPWVEEEMELL
SNDSYQKAHAYLAAKKGFKGKAVSDYEMEPEELARLVVRQKLKPLRKKIKAYRFVDVKAL
YRQLFAGFLEDNQAELPAEWEAICRQTLDKLSEEELFYEDATPFLLLKELILGFQTNTAI
RHIVIDEAQDYSPFQFEFLKRLFPSARMTVLGDFNQAIFAHAGEFNDFDVLTNLYGTDQT
ETIRLAQSYRATKPIIEFTRRLVPEGNAIVPFERQGEKPVLTEVADHAELHRCIMERVAE
LRGKFGTIAIICKSASEAAHAHEALSGIEGLKRMKTGSAEYEQGVIVIPSYLAKGIEFDA
VILYDASEQMYGQESLRRLFYTACTRAMHELQLFSVGKPSPFLEEALQEGLVRVEA
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
gtgaatctggaatttcaaaaggagcaaaaacgagtcgaccgcgtgatgcaggaagtcacc
gggcagctccgaagattggaagcagatacgtctcgccaaaaagacgatgtggtgaacatc
cgccgccatttctgggatgaaaacaaaataagcctcgattcgttcgacgatttcctggaa
acgatcatcggcttgcggcaggaagcacaggcgctgtccgtcagtgaaaccacccaccga
cagtccaccaaaaagctggcggaacttcgaagcatgcaaagaacgccgtatttcggccgc
atcgattttcaagaggaagacgaaccggaaaaagaagaagtctatatcggcatctcgaca
ttgaccgattcaacaggcgatgaattccttgtttacgactggcgcgcaccggtctcgagc
gtctactacgaccaccagccgggacccgcatcttattcaacgccaggcggggaagtgcga
gggcatttggagaagaaatggcaatatttgattcgcagcggcgttttagagtcgatgttc
gacacgagtctgaccattggggacgaaatcctgcagcaggtgcttggcaaaagcgccgac
aagaagatgcacagcatcgtcgcgacgattcagcaggaacagaaccgcatcatccgccac
gaccggacacgcctgctgatcgtacagggggcagccggcagcgggaagacttcggctgcg
ctgcagcgcatcgcgtatcttctctataaataccgggatcaattgaacgccgaccagatc
attctgttttcgccgaacgcaatgttttcgagctacgtgtcgaatgtgctgccggaactc
ggcgaagagaacatgcaccaagtgacgttccaagaatacttgaaccaccggttgagcgcc
cagtttgagcttgagaatccgtacggacagctggagtacgtgttgacgaaaagggacgat
ccggcatacgcggcccgtgtggcagccatccgcttcaaggcatcggtccagtttttcgaa
gccatcaaatcgtatcggcggacgttggaggagtccggcatgatattcaagcgcatccgt
ttcgctggacatccgattgcaagcgccgaagccattgaagcgcggttttattcccgcgac
acaacgctgcgtttccacaaccggctggaagggttgaaggactggctgttgaaagagctc
gatgaatttgaaaaacaggaatgggaagagccgtgggtggaagaggaaatggagctgctc
agcaacgattcctaccagaaagcgcatgcctatctggcagcgaaaaaaggttttaaagga
aaagcggtgagcgactacgaaatggagccggaagaactggcccggcttgttgtgcgccag
aagctgaaaccgctccgaaaaaagatcaaggcttaccgctttgtcgatgtcaaagcactg
taccgccaactttttgcaggatttttggaagataatcaggcggaactgcctgcggaatgg
gaagccatttgccggcagacacttgataagctttcggaagaggaactgttttacgaagac
gccacgccgtttctgctgttgaaagaactgattctcggctttcagacgaacacggcgatc
cgccacattgtcatcgatgaggcacaggattactcgccgttccagtttgaatttttgaag
aggctgtttccctcagcgcgcatgacggtgctcggcgacttcaaccaggcgatttttgcc
catgccggtgaattcaacgattttgatgtgctgaccaacctgtacggaacagatcaaacc
gaaacgatccgtctggcgcaaagctaccgcgccaccaaaccaatcatcgaattcacccgc
cggcttgtgccggaaggcaacgccatcgtcccgtttgagcggcaaggcgaaaagccggtc
ctgacggaagtagcggatcatgcagaactgcatcgctgcatcatggagcgggtcgcagaa
ctgcgcggcaaattcggcacgattgccatcatctgcaaatccgcttccgaagccgcgcat
gcccatgaagccttgtccggcatcgaggggctgaagcggatgaagaccggctccgccgaa
tacgagcagggcgtcatcgtcatcccgtcgtatttggcaaaaggcatcgagttcgacgcc
gtcatcctctacgacgcctcggaacagatgtacggacaggaaagcctgcgccgcctgttc
tacaccgcctgtacgcgtgctatgcacgaactgcagcttttctccgtcggcaaaccgagt
ccgtttctagaggaagcactgcaggaagggctggttcgggttgaggcatga
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integrated database retrieval system
