Pseudomonas serboccidentalis: NN484_00020
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Entry
NN484_00020 CDS
T10180
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
plis Pseudomonas serboccidentalis
Pathway
plis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NN484_00020 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plis03400
]
NN484_00020 (recD)
Enzymes [BR:
plis01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NN484_00020 (recD)
DNA repair and recombination proteins [BR:
plis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NN484_00020 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
NAT10_TcmA_helicase
SH3_13
AAA_22
Viral_helicase1
UvrD-helicase
AAA_17
AAA_16
SLFN-g3_helicase
AAA_28
NTPase_1
AAA_25
nSTAND3
T2SSE
NACHT
AAA_5
Motif
Other DBs
NCBI-ProteinID:
WDR36139
UniProt:
A0ABY7Z922
LinkDB
All DBs
Position
7302..9392
Genome browser
AA seq
696 aa
AA seq
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MNRTFADLSSGIDNPSSLAPLTSASDLLLLLDRWVERGWLRSLDKAFVGFLHELAPESDP
LVLLAAALTSHQLGHGHVCLDLFETLKAPDFALSLPPEGDVQSGVLLLPSQLLETLDGAH
WCKALASSSLVALAADNRDAAHQRPLVLSGKRLYLRRYWAYERRIDVALRTRLAQGETPP
DDLPQRLDELFGPARPGAVIDWQKLACALATRGAFSIITGGPGTGKTTTVVRLLALLQAP
AVEAGQPLRIRLAAPTGKAAARLTESISQQVQSLKVAETVREKIPCDVTTVHRLLGSRPG
TRHFRHHAGNRLPLDVLVVDEASMIDLEMMANLLDALPPHARLVLLGDKDQLASVEAGAV
LGDLCRDAEAGWYNPQTRQWLESVSGESLQDSGLHEDSDGSHPLAQQLVMLRHSRRFGEG
SGIGQLARRVNQQLPEEARQLLTAGHYDDVFSLPLKGEHDHPFERLLLEGHGEGPQGYRH
YLNVLRQQRPPAGRPLEHPDWINWARNVLQAFDTFQLLCAVRKGPWGVEGLNLRITEALL
KARLIEHDQQWYEGRPVLMTRNDYGLGLMNGDIGIALKLPEREGPDAGKPVLRVAFPRND
GQGGVRFVLPSRLNDVETVYAMTVHKSQGSEFAHTALILPDALNPVLTKELIYTGITRAK
HWFTLIEPRAGVFEEAVQRKVKRLSGLMLELEEAQG
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtaccttcgccgacctgtcatcgggtatcgacaacccatcgagcctggcgccg
ctgacgagtgcctcagatctgctgctattgcttgatcgctgggtcgagcgaggctggctt
cgctcgctggacaaggccttcgtcggctttctgcacgaactcgcgcccgagtccgatccg
ctggtgctgctcgcagccgcactgaccagccaccaactggggcacgggcatgtctgcctg
gatcttttcgaaaccctcaaggcaccggatttcgctctgtctctgccacccgaaggcgat
gtgcagagtggcgtcttgctgctgccgtcgcagttgcttgaaacgctggacggcgcccat
tggtgcaaggcgttggcaagcagctctctggttgcgctggcagcagacaaccgcgatgcg
gcgcaccagcggccgttggtgctgtccggcaagcgcctgtatctgcggcgatactgggcg
tatgagcgtcgcatcgatgttgcgttgcgcacacgtctggctcaaggtgaaacgccgccc
gatgacctgccccagcgtctcgatgaattgttcggccccgccaggccaggtgcagtgatc
gactggcagaaactcgcctgcgcccttgccactcgcggagccttcagcatcatcacgggt
ggcccggggactggcaagaccaccacggtggtgcgcctgctcgcgctgctccaggcgccg
gcggtggaggccggtcagccgttgcgcattcgtctggcggcgccgactggcaaggcggcg
gcgcgtttgaccgagtccatcagccagcaagtgcagtcgcttaaagtcgctgaaaccgtg
cgcgagaagatcccctgcgacgtgaccaccgtccatcgcttgctgggcagtcgtcccggc
acccggcacttccgtcaccatgccggtaaccgtttgccgctggatgtgttggtggtcgat
gaagcctccatgatcgacctggagatgatggccaacctgcttgatgcgttgccgccgcat
gcgcgtctggtgctgctcggcgacaaggatcaactcgcttccgtggaggccggggcggtg
ctgggcgatctgtgccgcgatgccgaggctggttggtataacccgcagactcggcaatgg
ctggaatcggtcagtggtgagtccttgcaggacagtggtctgcacgaagacagtgacggc
tcccatccgctggcccagcaactggtgatgctgcgccattcgcggcgcttcggtgaaggc
agcggcatcggtcagcttgcgcgtcgggtcaatcagcagttgccggaggaggcgcggcag
ttgctgacggccggtcactatgacgatgtgttttcactgccgctcaaaggcgaacacgat
cacccgttcgagcggctgctgctcgaaggccatggcgagggtccgcagggctatcgccac
tatctgaatgtgctgcgccaacaacgcccgccggcgggcagaccgctggagcatccggac
tggatcaactgggcacggaatgtgttgcaggcgttcgataccttccagctgttatgcgct
gtgcgcaaggggccttggggcgttgaagggctgaatctgcggatcaccgaagccttgctc
aaagcgcgcctgatcgagcatgaccagcaatggtacgaaggccggccggtgttgatgact
cgcaacgactacggtctgggtctgatgaacggcgatatcggcatcgccctcaagttgccc
gagcgcgagggtccggacgccggcaaaccggtgttgcgcgttgcctttccgcgtaacgat
ggtcagggcggtgtgcgtttcgtactgccgagccgtctcaacgatgtggaaacggtgtac
gcgatgacggtgcacaaatcccaaggctcggagttcgcccacaccgcgttgatcctcccg
gatgccttgaatccggtgttgaccaaggaattgatctataccggtattactcgggccaag
cactggttcaccttgattgaaccgcgggccggagtgtttgaagaggcggtgcagcgcaag
gtcaagcgcctgagcggactgatgttggaacttgaagaggctcagggatga
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