Pseudomonas serboccidentalis: NN484_00505
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Entry
NN484_00505 CDS
T10180
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
plis Pseudomonas serboccidentalis
Pathway
plis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NN484_00505 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plis03019
]
NN484_00505 (pnp)
03016 Transfer RNA biogenesis [BR:
plis03016
]
NN484_00505 (pnp)
Enzymes [BR:
plis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NN484_00505 (pnp)
Messenger RNA biogenesis [BR:
plis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NN484_00505 (pnp)
Transfer RNA biogenesis [BR:
plis03016
]
Prokaryotic type
tRNA degradation factors
NN484_00505 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
WDR36230
UniProt:
A0ABY7ZA58
LinkDB
All DBs
Position
131765..133870
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQQAASSLDMVV
AGTSDAVLMVESEAKELTEDQMLGAVLFAHDEFQVVINAVKELAAEAAKPTWTWAPAPEA
TELLGAIRAEFGEAISQAYTITVKADRYARLGELKDQVVAKLSGEEGQPSAADVKAAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVSAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKDAAEAARQRVLSITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaaaaaattccagttcggtcagtcgaccgttaccctcgagactggc
cgtatcgcccgtcaggcctccggcgcagtattggtcaccgttgacgacgacgtcagcgta
ttggtgaccgtagtcggtgccaagcaagccgatccaggcaagggcttcttccctctgtcc
gttcactaccaggaaaagacttacgctgccggtaagatccctggcggtttcttcaagcgt
gaaggccgtccttccgagaaagaaaccctgacttcccgactgatcgaccgtccgatccgt
ccgctgttcccagaaggcttcatgaacgaagtgcaggttgtctgcaccgtcgtttccacc
agcaagaagaccgatccggacatcgctgcgatgatcggtacctcggctgccctggcaatc
tcgggcattccgttcgacggcccgatcggcgccgctcgcgttgctttccacgaaagcacc
ggctacctgctgaaccctacttacgagcagcaagctgcttcgagcctggacatggtcgtt
gccggtacttcggacgccgtactgatggttgaatcggaagccaaagagctgactgaagac
cagatgctgggcgcggtactgttcgctcacgacgagttccaggtggtgatcaacgccgtt
aaagaactggccgccgaagctgccaagccaacctggacctgggctcctgctccagaagcc
accgagctgctgggcgcgatccgtgccgagttcggcgaagcgatctcccaggcttacacc
atcaccgtcaaggctgaccgctacgcgcgtctgggcgagctgaaagaccaggtcgttgcc
aagctgtccggcgaagaaggccagccttcggctgccgacgtcaaagcggctttcggtgaa
atcgaataccgcaccgttcgcgaaaacatcgttaacggcaagccacgtatcgacggccgc
gacacccgcaccgtacgtccgctgaacatcgaagtcggcgttctgccgaagactcacggt
tcggccctgttcacccgtggcgaaacccaggctctggtcgttgcaacgctgggtactgcc
cgtgacgcacagttgctggacaccctggaaggcgagaaaaaagacccgttcatgctgcac
tacaacttccctccgttctcggtgggcgagtgtggtcgcatgggtggtgctggtcgtcgt
gaaatcggtcacggccgtctggcccgtcgttcggtttcggctatgctgccggccgccgac
gtgttcccgtacaccattcgtgtggtgtcggaaatcaccgaatccaacggttcgagctcg
atggcttccgtttgcggcgcttccctggctctgatggacgctggcgttccaatgaaagcg
ccggttgccggtatcgccatgggtctggttaaagaaggcgagaagttcgccgtcctgacc
gacatcctgggtgacgaagaccacctgggcgacatggacttcaaggtagccggtaccgcc
aaaggcgtcaccgcgctgcagatggacatcaagatcaagggcatcaccgaagagatcatg
gaaatcgctctgggccaagccctggaagcgcgcctgaacatcctcggccagatgaaccag
atcattggccagtcgcgtaccgaactgtcggccaacgctccgaccatgattgcgatgaag
atcgacaccgacaagatccgtgacgttatcggtaaaggtggcgcgaccatccgtgcgatc
tgcgaagagaccaaggcttcgatcgacatcgaagacgacggctcgatcaagatcttcggc
gaaaccaaggatgccgcagaagctgctcgtcagcgcgttctgagcatcactgcagaagct
gagatcggcaagatctacgtcggcaaggttgagcgcatcgtcgacttcggcgcattcgtc
aacatcctgccgggcaaggacggtctggtgcacatctcgatgctgagcgacgctcgcgta
gagaaagtcaccgacatcctgaaagaaggtcaggaagtggaagtgctggtactggacgtg
gacaaccgcggccgtatcaagctgtccatcaaagacgtggcagctgccaaggcttcgggc
gtttaa
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