Pseudomonas serboccidentalis: NN484_01235
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Entry
NN484_01235 CDS
T10180
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
plis Pseudomonas serboccidentalis
Pathway
plis02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
plis00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NN484_01235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plis03021
]
NN484_01235
Transcription machinery [BR:
plis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NN484_01235
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_24
GerE
HTH_20
HTH_7
HTH_28
HTH_11
HTH_5
HTH_38
HTH_40
TnsD
HTH_10
HTH_36
Trp_repressor
DUF1492
Motif
Other DBs
NCBI-ProteinID:
WDR36371
UniProt:
A0ABY7Z9X2
LinkDB
All DBs
Position
complement(291993..292481)
Genome browser
AA seq
162 aa
AA seq
DB search
MPSAHPVESLYHDHHRWLTGWLRRRLGCPESAADLAQDTFIRVLSAREPAVIIEPRAFLT
TLAKRVLFNHYRRQDLERAYLETLAQMPEMLAPSEEDKAIILQTLIELDQLLDGLPHVVK
RAFLLAQVDGLTYPQIATELNISVATVKRHLNKAAMRCYFAL
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
ttgccgtccgcccatcccgtcgaatcgctctaccacgaccaccaccgttggctcaccggc
tggttgcggcgcagactcggctgcccggagagcgcggcggatcttgcccaggacaccttc
atccgggtgctgagcgcccgcgaaccagcggtgatcatcgaaccgcgcgccttcctcacc
acccttgccaaacgcgtgctgttcaatcattaccgccgtcaggacctggaacgcgcctac
ctcgaaaccctggcgcaaatgccggaaatgctcgcgccttcggaagaagacaaagccatc
atcctgcaaaccctgatcgagctggaccagttgctcgacggcttgccgcatgtggtcaaa
cgcgcctttttgctggcgcaggtcgatggcctgacctatccgcagatcgccactgaattg
aacatctcggtggccacggtgaaacgtcatttgaacaaggcagcgatgcgctgctacttc
gcgctatga
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integrated database retrieval system
