Pseudomonas serboccidentalis: NN484_01515
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Entry
NN484_01515 CDS
T10180
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
plis Pseudomonas serboccidentalis
Brite
KEGG Orthology (KO) [BR:
plis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plis03032
]
NN484_01515
03036 Chromosome and associated proteins [BR:
plis03036
]
NN484_01515
03400 DNA repair and recombination proteins [BR:
plis03400
]
NN484_01515
DNA replication proteins [BR:
plis03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NN484_01515
Chromosome and associated proteins [BR:
plis03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NN484_01515
DNA repair and recombination proteins [BR:
plis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NN484_01515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
HU-CCDC81_euk_2
SSPI
HTH_IclR
NTS
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
WDR36423
LinkDB
All DBs
Position
355004..355285
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AA seq
93 aa
AA seq
DB search
MALTKDQLIADIAEAIDAPKTTARNALDQLGQIVADQLENGGEITLPGIGKLKVTERPAR
TGRNPSTGAAIEIPAKKVIKLVVAKGLTDAVNK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggctcttactaaagaccaactgatcgccgacatcgctgaagctatcgacgcgccgaaa
accaccgcgcgtaacgctctggaccaactgggccaaatcgttgccgatcagctggaaaac
ggcggcgaaatcaccttgccaggtatcggcaagctgaaagtgaccgagcgtcctgcccgc
actggccgtaacccttcgactggcgctgccatcgaaatccctgccaagaaagtgatcaag
ctggttgtggccaaaggcctgaccgacgctgtgaacaagtaa
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