Pseudomonas serboccidentalis: NN484_01980
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Entry
NN484_01980 CDS
T10180
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18302
membrane fusion protein, multidrug efflux system
Organism
plis Pseudomonas serboccidentalis
Module
plis_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
plis00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plis02000
]
NN484_01980
01504 Antimicrobial resistance genes [BR:
plis01504
]
NN484_01980
Transporters [BR:
plis02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NN484_01980
Antimicrobial resistance genes [BR:
plis01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
NN484_01980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
CusB_dom_1
PTS_EIIA_1
Elf-1_N
FapA
FliJ
LPAM_2
Motif
Other DBs
NCBI-ProteinID:
WDR36512
LinkDB
All DBs
Position
456865..457965
Genome browser
AA seq
366 aa
AA seq
DB search
MFRHALSFAVPVSLAFLLSACGQEEAAQVSIRPAMVVQPVPSAQAMESYPGEVRARYEPD
LAFRIGGKVSRRLVEEGQRVKADQPLAELDPQDVRLQLEATRAQVAAAEANLNLVRAERD
RYKTLMERQMVSRSAYDNAENLYRSGEARLKQIKAEFNVSTNQASYAVLRAPQDGVVAKR
SVEVGQVVAAGQTVFTLATDGEREVSISLPEQSFGRFKVGQPVTVELWTQQNQRFAGQIR
ELSPAADPKSRTFAARISFTSGKVPAELGQSARVFVQSADAVPLSVPLSALTAENGATYV
WVVSANNTLKKTPVRVGPFGEKSVPVLEGLSASDWVVAAGVHVLLEGQQVRPVDRSNRVV
NLADKE
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgttccgccatgcgttgtcctttgccgtgccagtcagcctggcgtttttattgtccgca
tgcggtcaggaagaggcggcgcaagtcagcattcgaccggccatggtggtgcagccggtg
ccttcggcgcaggcgatggaaagttatccgggcgaggttcgcgctcgctacgaacccgat
ctggcgttccgcatcggcggcaaagtcagccgacgactggtcgaagaaggccagcgcgtg
aaggccgatcagccactcgccgagctcgatccgcaggacgtgcgcttgcaactcgaagcg
acccgcgcgcaggtcgccgccgccgaagccaatctgaatctggtacgcgccgagcgtgac
cgctacaagaccttgatggagcggcagatggtcagccgttccgcctacgacaacgcggaa
aacctttaccgctccggcgaagcccgcctcaagcagatcaaagccgaatttaacgtctcg
accaaccaggccagttacgccgtgttgcgtgcgccgcaggacggcgtggtggccaagcgt
tcggtggaagtcgggcaggtggttgccgccgggcaaaccgtgttcaccctcgccaccgat
ggcgagcgcgaagtgtcgatcagtttgccggagcagagcttcggccgtttcaaggtcggc
cagcccgtgaccgttgaattgtggacgcagcagaaccagcgcttcgccgggcagattcgc
gagctgtcgccggcagccgatccgaaatcccgcaccttcgctgcgcgcatctcgttcacc
agcggcaaagtaccggccgagctgggccagagcgcgcgggtgtttgtgcagtcggccgat
gcggtgccgttgtcggtgccgctctcggcgctgaccgcggaaaacggcgcgacctacgtc
tgggtcgtcagcgccaacaacaccttgaaaaagaccccggtgcgcgtcggcccgttcggc
gagaaaagcgtgccggtgctcgaaggcctgagcgccagcgactgggtggtcgccgccggt
gttcacgtgttgctcgaggggcagcaggtgcgtcctgtggatcgctccaaccgtgtggtc
aatctggcggacaaggagtaa
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