Pseudomonas serboccidentalis: NN484_02215
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Entry
NN484_02215 CDS
T10180
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
plis Pseudomonas serboccidentalis
Brite
KEGG Orthology (KO) [BR:
plis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plis03016
]
NN484_02215 (truD)
Enzymes [BR:
plis01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
NN484_02215 (truD)
Transfer RNA biogenesis [BR:
plis03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NN484_02215 (truD)
Prokaryotic type
NN484_02215 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
LacI
E3_binding
AEP-TOTE
Motif
Other DBs
NCBI-ProteinID:
WDR36556
LinkDB
All DBs
Position
514160..515218
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AA seq
352 aa
AA seq
DB search
MNELQLLGPRAYGEPLGTAVLKAIAEDFQVDEVLDIPFSGDGEHLWIWVEKRGLNTEEAA
RRIAKAAGVSLRTVSYAGLKDRQALTRQWFSVQLPGKADPDLSAAENDTLKILKTTRHKR
KLQRGAHSANGFTLRLTQFAGDKEAIEQRLQLIAKQGIPNYFGAQRFGHDGGNVVDARAW
AARKALPEQRNVRSRLLSTARSFLFNQVLAARVADGTWQQAQVGDLLAFTDSRSFFPAGE
AECSDPRLAILDLHPTGPQWGEGDSPAAGAVHDLEQGIAEREADLRDWLINAGMSHERRI
LRLPIGGLSWHYPQPDILQLEFVLPAGCFATVLVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactgcaattgctcggcccgcgagcctatggcgaacccctcggtaccgcagta
ctgaaagccatcgccgaagattttcaggtcgacgaagtgctcgacatcccgttcagcggc
gatggtgaacacctgtggatctgggtggaaaaacgtggcctgaacaccgaggaagcggcg
cgccgaattgccaaggcagccggcgtgtccttgcgtaccgtcagctatgccgggctcaag
gatcgtcaggcgctgacccgccagtggttcagcgtgcaactgccgggcaaggctgatccg
gacctgtcggcggcggagaacgatacgctgaagatcctcaagaccacgcgccacaagcgc
aagctgcaacgcggcgcgcattcggccaacggttttaccctgcgcctgacccagttcgcc
ggcgacaaggaggcgatcgaacagcgtctgcagttgatcgccaagcaaggcattcccaat
tatttcggcgcccagcgtttcggccatgacggcggcaacgtcgttgatgcgcgtgcgtgg
gcggcgcgcaaggctctaccggagcagcgcaatgtgcgttcgcggctgctgtcgacggcg
cgcagttttctgttcaatcaggtcttggcggcgcgggttgccgacggtacctggcagcag
gcgcaggtgggcgatctgctggcgttcaccgacagccgtagttttttcccggccggtgaa
gccgaatgcagcgatccgcgtctggcgattctcgatctgcaccccaccggtccgcagtgg
ggcgaaggtgactcaccggctgccggcgctgtccatgatctggagcaggggattgccgag
cgcgaggccgacctgcgcgattggttgatcaatgccggaatgagccacgaacgtcgcatc
ctgcggctgcccattggcgggttgtcgtggcattatccccagcctgacattctgcaactg
gaattcgtcctcccggccggatgcttcgccaccgtattggtgcgcgaactcgttgatctg
gtgccggtggggcagacggacagcccatgcgtattctga
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