Pseudomonas serboccidentalis: NN484_04375
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Entry
NN484_04375 CDS
T10180
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
plis Pseudomonas serboccidentalis
Pathway
plis00260
Glycine, serine and threonine metabolism
plis00460
Cyanoamino acid metabolism
plis00630
Glyoxylate and dicarboxylate metabolism
plis00670
One carbon pool by folate
plis00680
Methane metabolism
plis01100
Metabolic pathways
plis01110
Biosynthesis of secondary metabolites
plis01120
Microbial metabolism in diverse environments
plis01200
Carbon metabolism
plis01230
Biosynthesis of amino acids
plis01240
Biosynthesis of cofactors
plis04981
Folate transport and metabolism
Module
plis_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
plis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NN484_04375
09102 Energy metabolism
00680 Methane metabolism
NN484_04375
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NN484_04375
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NN484_04375
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NN484_04375
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NN484_04375
Enzymes [BR:
plis01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NN484_04375
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
WDR36971
LinkDB
All DBs
Position
complement(951582..952835)
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALIQPGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGINTDTGLIDYDEVERLAVECKPKMIVAGFSAYSK
TLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEALEPGFKAYQQQVIDNAKAMAS
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVAQCEVLAGWICDILDNLGDADVEANVAKNVAALCADYPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccagggttacgacgatgcactgctggcggcgatgaat
gccgaggagcaacgtcaggaagatcacatcgagctgatcgcgtcggaaaactacaccagc
aaacgcgtgatgcaagcgcaaggcagcggcctgaccaacaaatacgccgaaggttatccg
ggcaagcgctactacggtggctgcgagcatgtggataaagtcgaagcgctggccatcgag
cgcgccaagcaactgttcggcgccgattacgccaacgtccagccgcactccggttcgtcg
gccaacagcgccgtgtacctggcgctgatccagccgggcgacaccatcctcggcatgagc
ctggcccacggcggtcacctgacccacggcgccaaagtgtcgtcctcgggcaagctgtac
aacgccgtgcagtacgggatcaacaccgacaccgggctgatcgattacgacgaagtcgag
cgtctggccgtcgagtgcaagccgaagatgatcgttgccggtttctccgcttactcgaag
accctggacttcccgcgcttccggcagatcgccgacaaggtcggtgcgctgctgttcgtc
gacatggcccatgtggccggtctggtcgccgccggtctgtacccgaacccgctaccgtac
gccgacgtggtcaccaccaccacccacaaaaccctgcgcggtccgcgtggcgggctgatc
ctggccaagtccaacgaagagatcgagaagaagctcaacgccgcggtattccccggcgcc
cagggcggcccgctgatgcacgtcatcgccggtaaggcggtgtgcttcaaggaagcgctg
gagccaggcttcaaggcctatcagcagcaagtgatcgacaacgccaaggccatggccagc
gtgtttatcaaacgtggctacgatgtagtgtccggcggtaccgataaccacctgttcctg
gtcagcctgatccgtcagggcctgaccggcaaagatgccgacgctgccctcggccgcgcc
cacatcaccgtcaacaagaacgccgtgccgaacgacccgcaatcgccgttcgtgacctcg
ggcctgcgcatcggcaccccggccgtcaccacgcgtggcttcaaggtcgctcagtgcgaa
gtgctggccggctggatctgcgacattctcgacaacctcggtgacgccgacgttgaagcg
aatgtggccaagaacgtcgcggcactgtgcgccgactacccggtttatcgctga
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