Pseudomonas serboccidentalis: NN484_04415
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Entry
NN484_04415 CDS
T10180
Symbol
dgcB
Name
(GenBank) dimethylglycine demethylation protein DgcB
KO
K21834
N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
Organism
plis Pseudomonas serboccidentalis
Pathway
plis00260
Glycine, serine and threonine metabolism
plis01100
Metabolic pathways
Module
plis_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
plis00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NN484_04415 (dgcB)
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Gene cluster
GFIT
Motif
Pfam:
DUF3483
CCG
Fer4_8
Fer4_10
Fer4_9
Fer4_17
Fer4_16
Fer4_6
Fer4_2
Fer4
Fer4_4
Fer4_7
Fer4_21
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
WDR36979
LinkDB
All DBs
Position
complement(961745..963694)
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AA seq
649 aa
AA seq
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MLNTLLPILLFAALGLAVLGALRRVAMWRRGRASKVDLIGGLFAMPKRYMVDLHHVVARD
KYIANTHVATAGGAVASIVLAILVHGFGLHNRILGYALLLMTAVMFVGAIFVYRRRLNPP
ARLSKGPWMRLPKSLLAFSASFFLVTLPVAGILPENFGGWLLAAILGIGVLWGVSELFFG
MTWGGPMKHAFAGALHLAWHRRAERFGGGRSTGLKPLDLNDPSAPLGVEKPKDFTWNQLL
GFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPGKPVGEHSG
NPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEKGATPNKGAEV
LENLIATDNPGGFAPGGRMNWAADLNLNLLSEKKSTDVLFWVGDGAFDMRNQRTLRAFVK
VLKAAKIDFAVLGLEERDSGDVARRLGDEATFQLLAKRNIQTLAKYSFNRIVTCDPHSFH
VLKNEYGAFDGDYLVQHHSTYMAEIIQAGALNLGQHKGNSVTYHDPCYLGRYNGEYEAPR
EVLRALGIEVKEMQRSGFRSRCCGGGGGAPITDIPGKQRIPDMRMEDIRETGAELVAVGC
PQCTAMLEGVVEPRPLIKDIAELVADALLEDAAPSKPTTPAKREPAEAH
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacacccttcttccaatcctgttgttcgcagccctgggccttgcggtgctgggc
gcgttgcgacgggtggccatgtggcgtcggggccgggcctcgaaggtcgacctgatcggc
ggcctgttcgccatgcccaagcgctacatggtcgacttgcaccacgtggtggcgcgggac
aaatacatcgccaacacccacgtcgccacggcgggcggtgcggtggcgtcaatcgtgctg
gcgattctggtgcacggtttcggcctgcataaccgcatcctcggttatgcgctgctgctg
atgacggcggtgatgttcgtcggtgcgatcttcgtttaccggcgccggctcaacccgccg
gcacggctgtcgaaaggcccgtggatgcgcctgccgaaaagcctgctggcgttttccgcc
tcgttctttctggtgacgctgccggtggccggaattctcccggagaacttcggcggctgg
ttgctcgcagcgattctcgggatcggcgtgctgtggggcgtgtcggaactgttcttcggc
atgacctggggcgggccgatgaagcacgccttcgccggtgccctgcatctggcgtggcac
cgtcgcgccgagcgctttggcggcggccgttccaccggtttgaaaccgctggatctgaat
gatccgagcgcgccattgggcgtggaaaaacccaaggatttcacctggaaccaactgctc
ggttttgacgcctgcgtgcagtgcggcaagtgcgaagccgcttgcccggccttcgctgcc
ggccagccgctgaacccgaagaaactgattcaggacatggtcgtcggcctggctggcggc
actgacgcgaagttcgctggcagcccgtatccgggcaaacctgtgggcgaacacagcggt
aatccgcatcagccgatcgtcaacggtctggtcgatgccgagaccctctggtcatgcacc
acctgccgcgcctgcgtcgaggagtgcccgatgatgatcgagcacgtcgacgccatcgtc
gacatgcgccgccatctgactctggaaaaaggcgcgaccccgaacaagggcgccgaggtt
ctggaaaacctgatcgccaccgacaaccctggcggtttcgctccgggcgggcggatgaac
tgggcggcggatctgaacctcaatctgctcagcgagaagaaatctaccgacgtactgttc
tgggtcggcgacggcgccttcgacatgcgcaaccagcgcaccttgcgcgccttcgtcaaa
gtgctgaaagccgcgaaaatcgacttcgccgtgctcggcctggaagagcgcgacagtggc
gatgtggcccgtcgtctcggtgacgaagcgaccttccagttactcgccaaacgcaatatc
cagaccctggccaaatacagcttcaaccgcatcgtcacctgcgatccgcacagcttccat
gtgctgaaaaacgagtacggcgccttcgacggtgattacctggtgcagcaccacagcacc
tacatggcggagatcattcaggccggcgcgctgaacctcggtcagcacaaaggcaacagc
gtgacctatcacgacccgtgctacctcggccgttacaacggcgagtacgaggcgccgcgt
gaagtgctgcgcgccctcggtatcgaggtcaaagagatgcaacgttccggcttccgttct
cgctgctgcggcggcggtggcggcgcgccgatcactgacattccgggcaagcagcggatt
cccgacatgcgcatggaagacattcgcgagaccggtgccgaactggtggccgtaggttgc
ccacagtgcacggcgatgctcgaaggcgtggtcgaaccgcgtccgctgatcaaggacatc
gccgaactggtggccgatgcgttgctcgaagacgccgcaccaagcaagccgactaccccg
gccaaacgtgaacctgcggaggcccactga
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