Pseudomonas serboccidentalis: NN484_05755
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Entry
NN484_05755 CDS
T10180
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
plis Pseudomonas serboccidentalis
Pathway
plis00300
Lysine biosynthesis
plis00470
D-Amino acid metabolism
plis01100
Metabolic pathways
plis01110
Biosynthesis of secondary metabolites
plis01120
Microbial metabolism in diverse environments
plis01230
Biosynthesis of amino acids
Module
plis_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
plis00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NN484_05755 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NN484_05755 (dapF)
Enzymes [BR:
plis01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NN484_05755 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WDR37236
UniProt:
A0ABY7ZDL6
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All DBs
Position
1248591..1249421
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRHTGIGFDQLLIVEAPSNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKRKIRVETKGGIIELDVRNDGQIGVNM
GAPRLVPADIPFEAPAQASSYQLEVDGTTVELAAVSMGNPHAVLRVQDINNAPVHELGPK
IEHHPRFPARVNVGFIQVIDRNRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVLMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaaaatgcacggcctgggcaatgacttcatggttctcgacctg
gtcagccagcacgcgcatattcagcccaagcacgccaagcaatggggcgaccggcacacc
ggtatcggtttcgaccagttgctgatcgtcgaagcgccgagcaacccggacgtggatttc
cgttaccggatcttcaactccgatggctcggaagtggaacagtgcggcaacggtgcgcgc
tgcttcgcccgcttcgtgctcgacaagcgcctgaccgccaagcgcaagattcgcgtcgag
accaagggcggcatcatcgagctggacgtgcgtaacgacggccagatcggcgtcaacatg
ggcgcgccgcgcctggtgccggcggacattccgttcgaagcgccagcgcaagcctccagc
tatcagctggaagtcgacggcacgacggtcgaactggccgccgtgtcgatgggcaacccc
catgcggtgctgcgcgtgcaggacatcaacaacgcaccggtgcatgaactggggccgaaa
atcgaacaccatccgcgcttcccggcgcgggtcaatgtcggtttcatccaggtcatcgac
cgcaaccgcgcgcaattgcgcgtctgggaacgcggagccggggaaacccaggcctgcggc
accggcgcctgcgctgcggctgtcgcggcaatcagtcaggggtggatggattcgccgctg
ttgatcgacctgcccggcgggcgtctgtccattgaatgggcaggccctggccaaccggtg
ctgatgaccggtccggcagtgcgtgtatacgaaggacaagtgcgtctttga
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